Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5337 |
Symbol | |
ID | 7116254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 5719016 |
End bp | 5719909 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643528029 |
Product | polysaccharide deacetylase |
Protein accession | YP_002424025 |
Protein GI | 218533209 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.135454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACAT CGGCGCCGCC CCCTGCCGGC CATGGCCGCT ACGCCTATTC CGCCCTGCCG GACCGCCCGG TCTATGACTG GCCGGAGGGC AAGCGCCTCG CGGTCTACCT CGCGCTCAAT CTCGAAACCT TCGCGTTCGG TGACGGCCTC GGCGCCGAGT TGGCGCCGGG CGGGCCGCAG CCGGACGTCC TCAATTATGC CTGGCGCGAC TGGGGCAACC GGGTCGGCGC ATGGCGCGTC CGCGACATGC TCGACGACCT GCGGATGCCA GCGAGCATCC TCGTCAACAG CCGGATCTAC CGGGACTGCC CCGGCCTGAT CGAGGCCTTT CGCGCCCGCG GCGACGAGAT CGTCGGCCAT GGGCGCAGCA ATGCCGAGCG GCAGGGCACC CTCTCGGAAT CCGAGGAGCG CGCCCTCATC GCCGAGGCCA CCGCCGTGCT GACGCGGGAG GAGGGTAGGG CGCCCGCGGG CTGGCTCGGC CCCTGGATCT CGCAATCGCG GTTCACGCCG GACCTGCTGG CCGAGGCGGG CTACCGCTAC CTGCTCGATT GGTGCCACGA CGACCAGCCG ACATGGTTCG CAACCCGCGA CGGCGGGCGC ATCCTCTCGG TGCCCTATCC CCAGGAACTC AACGACATCC CCGCGATCGT CGCTCGCAAG GACACGGGAC GCGCCTTCGC CGAGGCGATC ACCGACGCCT TCGAGGAGAT GCTGGAGCAG TCGCGCCGCG CGCCGCTGGT CATGGGCATC GCGCTCCACC CCTACATCGT CGGCCAGCCG CACCGCTTAC GTCCCCTGCG GCAGGCGCTC GAACGGGTCG CCGGGCATCG CGACTCGGTC TGGCTCACCA CCGCCGGCGC AATTGCGGCG CACGCCGCCG AATTGCTGGA ATAG
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Protein sequence | MTTSAPPPAG HGRYAYSALP DRPVYDWPEG KRLAVYLALN LETFAFGDGL GAELAPGGPQ PDVLNYAWRD WGNRVGAWRV RDMLDDLRMP ASILVNSRIY RDCPGLIEAF RARGDEIVGH GRSNAERQGT LSESEERALI AEATAVLTRE EGRAPAGWLG PWISQSRFTP DLLAEAGYRY LLDWCHDDQP TWFATRDGGR ILSVPYPQEL NDIPAIVARK DTGRAFAEAI TDAFEEMLEQ SRRAPLVMGI ALHPYIVGQP HRLRPLRQAL ERVAGHRDSV WLTTAGAIAA HAAELLE
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