Gene Mchl_5228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5228 
Symbol 
ID7113836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5595591 
End bp5597006 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content70% 
IMG OID643527921 
Productprotein TolA 
Protein accessionYP_002423918 
Protein GI218533102 
COG category 
COG ID 
TIGRFAM ID[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.219448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0816314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTGC GCTGGCCCAC TTCCCTCACC GAGTCTTTTC GAAATCGCGA ACCCGGCGTC 
TGGATCTCGG CCGCGGTCCA TGCCGTCGTG CTGGGCGCCG CCCTGTTCGT CGTCGCCGCG
CCGGTCCTGC CGGAAGGGGA AGAGGGCGTG CCGGTCGAGG TGCTGACGGA GCAGCAATTC
TCCGAATTGA CCCGTGGCGA GCTCAACGCG GAAAAGCCCG AGAACAAGCC GAACCGCGCT
GATCGCGTGG CGGAGAAGCA CGAGCAGCGC GAGCCCGAGA ACGCCAAAAC CGACGCGCCG
GCCGCGCCCA CCCGCACCGC CGACACCCGG CTCGCCGCCG TCGATGCGAT GCCGCTGCGG
GCCGACACCG CCGATCCGGT GAAGGAAGAG GCGGAGGCCG CCGCGGCCAA GGCGGAAGCT
GCCAAGGCCG AAGCCGAGAA GGCGGCCGCA GCCAAGGCCG CAGAGGCGAA GGCCAAGGCC
GAGGTCAAAG CGAAGGCGGA TGCCGCTGCG AAAGCCGAAG CGGCGAAGGC CGAAGCTGCC
AAGGCGGCCG AGGCGAAGGC GGCCGCCACA AAGGCGGAGG CCGAGAAGCG CGAGGAATTG
CAAAAGCTGG TCGAGCACGA ACAGGCGGAG GCCGAAGCCG CGGCCAAGGC CGCCGAGGCG
AAGGCCAAGG CGCGCGCCGA GGCCAAGGCG AAGGCCGATG CCAAGGCCAA AGCGGAGGCC
AAGGCCGAGG CGGAAGCCAA GGCGAAAGCA GAAGCGAAGG CCGAGGCAGA AGCCGAAGCG
AAGGCCAAGG CCGAAGCGGC CGCCAAAGCC GAGGCGGAGG CCGAGCACCG CAAGCAGGTC
GCCGAAGCCA AAGCCAAGGC GGAGGCCGAT GCGAAGGCCA AAGCCGAAGC CGCCGCGAAA
GCCAAGGCCA AGGCGATGGC CGACGCTAGG GCGAAGGCCG ATGCGGAGGC CAAGGCGCGC
CAACAGGCGG AACTCGCCAA CAGGACCAGC CCGGGCGACA GCCGCGAGAC GCAAACCCGC
GCCGCCTCGC AATCGACCGG CTCGACCGGC CGCGAAGTGC AGCGCACGGC CTCGCTCGGC
ACGGCCTCCG GCACCGCCCA GCGCCTGTCG CCGTCGTTGC GCGGCGCTCT CGTGGGCATG
CTGCAACAGC AGATCGAGCG CTGCTACTCG GCGCCGCCCG GCGCGACGCA GGGCGTGGTG
CTGCCGATGC TCGACATCCG CCTCAACCCG GACGGATCGC TCACCACCGA GCCGCGGGTC
ATGCGCGCGG GCAACAACTC GGTCGATCAG TCGATCGCCC AGGCAGCGCT GCGGGCAGTG
CGGCGCTGCG CACCCTTCAA GATTCCGGCC CAGTACGCGC CGTATTACAA CGACTGGAAG
GCCATCAACG CCGAGTTCGA GTTCTCGCCC GTGTGA
 
Protein sequence
MALRWPTSLT ESFRNREPGV WISAAVHAVV LGAALFVVAA PVLPEGEEGV PVEVLTEQQF 
SELTRGELNA EKPENKPNRA DRVAEKHEQR EPENAKTDAP AAPTRTADTR LAAVDAMPLR
ADTADPVKEE AEAAAAKAEA AKAEAEKAAA AKAAEAKAKA EVKAKADAAA KAEAAKAEAA
KAAEAKAAAT KAEAEKREEL QKLVEHEQAE AEAAAKAAEA KAKARAEAKA KADAKAKAEA
KAEAEAKAKA EAKAEAEAEA KAKAEAAAKA EAEAEHRKQV AEAKAKAEAD AKAKAEAAAK
AKAKAMADAR AKADAEAKAR QQAELANRTS PGDSRETQTR AASQSTGSTG REVQRTASLG
TASGTAQRLS PSLRGALVGM LQQQIERCYS APPGATQGVV LPMLDIRLNP DGSLTTEPRV
MRAGNNSVDQ SIAQAALRAV RRCAPFKIPA QYAPYYNDWK AINAEFEFSP V