| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5105 |
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| Symbol | |
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| ID | 7118980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 5471890 |
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| End bp | 5474334 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643527798 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002423797 |
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| Protein GI | 218532981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.599059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA CGCCCCTTTC CGCCACCGTC GAAGCCTTGA GCGAGGATGC CGCCCAGGCG
CGTCATGCCG AGCTATCGAG GGCGATCGAG CGGGCGAACC AGCTCTACTA CAACGAGGAC
GCGCCCGAAC TCACCGACGC CGAATATGAC GCCCTGCGCC AGGAGCTGGA GGCGATCGAA
GCGCGCTTTC CCGCGCTGAC CGGCACCACC GAGGCGAGCG CGGGCGTCGG CGCCAAGCCT
TCGGAAAAGT TCGCCAAGGT CCGGCACGCG GTGCCGATGC TCTCGCTCGG CAACGCCTTC
GCCGACGAAG ACGTGGACGA GTTCGTCGCC CGCGTGCGTC GCTTTCTCAA CCTGCCGGCT
GAGGAGGCGG TCGCCTTCAC CGCCGAGCCG AAGATCGACG GGCTGTCGCT GTCGCTGCGT
TACGAGGCGG GCCGGCTCGT CACCGCGGCG ACGCGGGGCG ACGGCGAGGT TGGCGAGAAC
GTCACCGCCA ACGCGCTGAC GGTGGACGAC ATCCCGGAAA CGCTCTCCGG CGAGGGCATC
CCCGAGGTGT TGGAGGTGCG CGGCGAGATC TACCTCTCAC ACGAGGATTT CGCCGCGATC
AACGCGCGCC AGGAGGCGGC GGGCAAGCCG CTCTTCGCCA ATCCGCGCAA CGCCGCGGCC
GGTTCGCTGC GCCAGCTCGA TCCGGCGATC ACCGCCTCAC GGCCCTTGCG CTTCTTCGCC
TATGCCTGGG GCGAGGTCTC CGAGCCCTTC ACCGACACGC AATCGGCGGT GCTGGAGCGG
TTCCGCGGCT GGGGCCTGCC GGTGAACCCG CGGACCAAGC TGTGCCGCTC GGCCGAGGAG
ATGATCGCGC ATTACCGCGC CATCGAGGCG GAGCGGGCGG GTCTCGGCTA CGACATCGAC
GGCGTCGTCT ACAAAGTGGA CGACCTTGGC TTCCAGCGCC GGCTCGGCTT CGTCAGCCGC
GCGCCGCGCT GGGCGCTGGC GCACAAATTC GCGGCGCAGG AGGCGATCAC CGAACTTCTC
GCCATCGACA TCAATGTCGG CCGAACCGGC TCGCTCAACC CGCTGGCGCG CCTCAAGCCC
GTCACCGTCG GCGGCGTCGT GGTCTCGAAC GCGACTTTGC ACAACGAGGG CTACGTCCAG
GGCGTGGGCG CCGACGGCGA GCCGATCCGC GAGGGTCGCG ACATCCGCGT CGGCGACACC
GTGATCGTGG TGCGCGCCGG CGACGTCATC CCGAAGGTGC GGGATGTGGT GATCGAGAAG
CGCCCGGCCG ACGCCGTTCC CTACGTCTTC CCGGATACCT GCCCGGCCTG CGGCAGCCGG
GCCGTGCGTG AACTCAACCC GCGTACGAAA AAACTCGATG CGATCCGCCG TTGTACCGGC
GGGTTGATCT GCCCGGCGCA GGGCGTGGAG CGGCTGAAGC ACTTCGTTTC GCGCAACGGC
CTCGACCTCG AAGGCTTCGG CCAGACCTAT ATCGAGGTGC TGTTCGAGGC CGGCCTCGTG
AAGCAGCCCG CCGACCTGTT CCGCCTGGAG TTCGAGCCGC TGAAGGCGGC CATCGTCGCC
CGGCGCGAGG CCCTCTCCGC CCAGCGCCGT ACCGAGGGCG AGCCGGCGCC GAAGAAGCCG
ACCAAGAAGA AGGGTGAGGA GGAGGACAAG GCGATCAAGA ACCTGCTCGC TTCGCTCGAC
GCCCGCCGAA CGATCCCCCT CAACCGCTTC CTGTTCGCCC TCGGCATCCC GCAGATCGGC
GAATCGACGG CCAAGGCGCT GGCTAAGCGC TTCCCCGACA TGCCCGCCCT GATGGCGGCC
CTCGCAGCGG CGACGCGGGA GCAGGCGGGC CGCGACTGGC TCGAACTCTC GGCGCTGCCG
CGGATCGGGC CCGGCACCCG CGACCGGCTG TTCGAGACCC TCGACCCGCT GCCCGGCGAG
GCGATGCAGG ATCTGAGCCT CGGCGCCCGC CTGCGGGGGC GGCTCACGCC GTCGCAGCGC
GAGGCGGTGC TCGCCCATTA CGGCAGCGAG GCGGAGGCCG ACGCGGCGCT GGAGCGGGCG
GCCTCGCAGC GGCCCGGCGA CGCCTACCGT CTGTTCGCCG ACGACGGCGA GATCGGCCCC
GTGGCGACGG ATTCGCTGAT CCAGTTCTTC TCCGAGCCGC ACAACGACGC GGCGGTGCGG
GCGCTGCTCG AAGAGGTGGG AACCGAGCCG CTGGCCGCCA CGACCTCGGC GGCGGCGTTT
GCCGGCAAGA CGGTGGTGTT CACCGGCTCC CTCGAAAAGA TGACCCGCAG CGAGGCCAAG
GCCACCGCCG AGCGCCTGGG CGCCAAGGTC TCCGGCTCGG TCTCGGCCAA GACCGACCTC
GTGGTCGCCG GCCCCGGCGC CGGCTCGAAG CTCAAGGACG CCGAGAAGCA CGGGGTGAAG
GTGGTCTCGG AGGACGATTG GCTGGCGATG CTGGCGGAGG CGTAA
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| Protein sequence | MPSTPLSATV EALSEDAAQA RHAELSRAIE RANQLYYNED APELTDAEYD ALRQELEAIE
ARFPALTGTT EASAGVGAKP SEKFAKVRHA VPMLSLGNAF ADEDVDEFVA RVRRFLNLPA
EEAVAFTAEP KIDGLSLSLR YEAGRLVTAA TRGDGEVGEN VTANALTVDD IPETLSGEGI
PEVLEVRGEI YLSHEDFAAI NARQEAAGKP LFANPRNAAA GSLRQLDPAI TASRPLRFFA
YAWGEVSEPF TDTQSAVLER FRGWGLPVNP RTKLCRSAEE MIAHYRAIEA ERAGLGYDID
GVVYKVDDLG FQRRLGFVSR APRWALAHKF AAQEAITELL AIDINVGRTG SLNPLARLKP
VTVGGVVVSN ATLHNEGYVQ GVGADGEPIR EGRDIRVGDT VIVVRAGDVI PKVRDVVIEK
RPADAVPYVF PDTCPACGSR AVRELNPRTK KLDAIRRCTG GLICPAQGVE RLKHFVSRNG
LDLEGFGQTY IEVLFEAGLV KQPADLFRLE FEPLKAAIVA RREALSAQRR TEGEPAPKKP
TKKKGEEEDK AIKNLLASLD ARRTIPLNRF LFALGIPQIG ESTAKALAKR FPDMPALMAA
LAAATREQAG RDWLELSALP RIGPGTRDRL FETLDPLPGE AMQDLSLGAR LRGRLTPSQR
EAVLAHYGSE AEADAALERA ASQRPGDAYR LFADDGEIGP VATDSLIQFF SEPHNDAAVR
ALLEEVGTEP LAATTSAAAF AGKTVVFTGS LEKMTRSEAK ATAERLGAKV SGSVSAKTDL
VVAGPGAGSK LKDAEKHGVK VVSEDDWLAM LAEA
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