| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5089 |
|---|
| Symbol | |
|---|
| ID | 7118963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5447542 |
|---|
| End bp | 5450112 |
|---|
| Gene Length | 2571 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643527782 |
|---|
| Product | Aspartate racemase |
|---|
| Protein accession | YP_002423781 |
|---|
| Protein GI | 218532965 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCATT TCACGCAGGA ATCGCCGGCC ATGACCGGCG AGGTTCACGG CGGCGACGCC
TTCACAGCCC GCTGCTCCCA CAGCCAGACG CGGTTCTGGC TGCTCGACCA GTTGAGGCCC
GGCGATCCGA GCCTGCACGT CGCCGCCCGC TGGCGCATCG CCGGACGGCT CGACGCCGAG
ATCCTCACCC GTGCCTTCCG CCTCCTGCTC GACCGGCACG AGGCTTTGCG CACGTCGATC
GTCGGCGAGG GTGGCCGGCC GGTGCAGCGG ATCGCCGGAA CGGTGCCGCT GGCCTTCTCC
GAAATCGACC TCTCCGGCCT GCCCGGCGAC CGCCTCGGCG AGGCGCGCGC GATCGCCGAG
TCGGAGGCCG GGAAGCCGTT CGATCTGGCC CGCGCGCCGC TCGTGCGGGT GACGCTGCTG
CGGCTCGGGC GCGGCGATTC CCTGCTGCTC GTCACCGCCC ATCACAGCAT CTGCGACGGC
TGGTCGATGG TGGTGCTGGC CCGCGAGTTC GTCGCGATTT ACAGCGCCCT GATCCGGGGA
CAGGTACCGG CTCTGGCGCC TGCGGCCCTG CACTATGCCG ACTTCGCGGA ATGGGAGATC
TCCCCGGCCC TCGCCGAGGC GGCGGAACGC GACCTCGCCT TCTGGGCGCG CTCGTTGCGC
GATCTCATCC CGTTCGAGCT GCCGCCGGAC CATCCCCGCC GCCCCGGCCG GGAGCGCCGC
TTCGCCGCCG AGACCCGCCC GCTTTCCGCC GATCTCGGTG CGCGCATGGA AGCGTACGCG
CGGGCGCAGG GTGCCACCCC CTTCGTCCTC GCCTGCACCA TCCTGTTCGG GCTCCTGAGC
GCGCGCACCG GGCGCGGCGA CATCGCCGTC GGCACGCAAG TGCTGGGGCG CGACGAGATC
GAGCTGGAAG GGGTCGTCGG CACCTTCGTG AACACGCTCG TGCTTCGGAC TCATGTCGAG
GCGGAGCAGA GCTTCGCCGA GCGGCTGGCG GCGACGCGCC GGACGATCCT CGACGCATGC
GATCACGCGC TCGCTCCCTT CGACCGGGTG GTGCAGGCGC TGGCGCCCTG CCGCGACGGG
CTGCGACCGC CGCTGGTGTC GGTCAACGTC CGGATGCGGC CGACACCCCA GGCGACGCCG
TCGGGCGGGT CCTCAGTCGG GGAGCCGGCC CCGATCCGCC TCGTCGATCT CGACTACGCC
CCCACCGGCA GCTTCTTCGA CCTCGATCTC GAACTTGCGC CGGGCGAGGC CGGCTGGCGC
CTGATCTGCG AGTACGATGC CGGCCTCTAC GCGGCGGAGA CCGTCGCCGG CCTGCTCGCC
GATTTCGAGC AGGCCGCCCG CGCGGCGGTC GGGGCGCGGC TGCCCGATCC GGCCCCCCTG
GGAAGCGGCG GGGGAGGGAT CGCGGGCGCG CTTGAACAGG CATCCCGGGA AGCGGGACAG
CCGGAGGCGG AGGAGACGGC CGCGCGGGCG ACGCCGGACG CGGCACCTGC GCCCGAGACG
GCTCCCCCGT TGGCGGGCGA GGCGGCGGGC GAACTTCTGC CGACGATACG CACGATCTGG
CGGGAGATGC TCGGCCGCCC CGACCTGTCC GACGACGAGG ATTTCTTCGC GGCGGGCGGG
CACTCGCTGC TGGCCGCCCG CGTCGTCGCG CGGATCGAGG CGGCGACGGG CCGAACCGTT
CCGCTCTGGT CGTTCTTCGA GGCGGGCACG GTCGCGCGGC TCTGCGCCTT CCTCGGCGGC
GAGGCGGCGG CGGGCGTGCG GCACCGCGCG CTTCAGGAGC CGACGGCGCA GGCGCGGCCC
GGCTTCACCG CGATCCACCA CGCTGCGGCC GATCAGGAAC TCTACCGGCC CCTATCCGAG
GCCCTGGGGG CGGACCATCC CTTCGCGACG CTGCAACTGG AAAGCCGGGT TCCGCCCCAC
GAGGAAACCC TGGAGCGGCT GGCCGGCGCC TATCGCGACG CGATCGAGGC CGCGCAGCCG
CAGGGGCCGA TCCGCCTCGT CGGGTTCTGC CGCTCGGGCG TCCTCGCCTT CGAGATCGCC
CGGCAGTTCG CGCAGGGCGG CCGGGACGTC GCCCTCGTCG TCCTGATCGA TTGCTGGGAG
CCCGGCTATA TCAGGCGCTT CAGGCCGCTC GCGCGCATGC GGGTGATGGC GGCCTACCGG
CGCGGCCGGC TCGCCGCGCT CATCCGCCAC GTCCGCCGCG ACGGCATCGG CTACCTCGGC
TCGCGGGCCC ATCTCTGGTT CCGCTCGCAT CGCGCCTGGC GCGGGTTGCG GCGTGCCCTG
AACCGGGTGG GGCTCGCCAC CCCGAGCCCG GAGGACGCGT TCTGGCAAGT GACCGACGAA
CTCGACGCGC TCGCCCTGGC CTACGAGCCG CGCCCCCATC CCGGGCCGGT GCTGATCGTC
CGCAGCGAGA GTGTTCCGGT CGGCCCCGCG CTCGACCCGA TGCTCGGCTG GCGGGCCCAT
GCCGAGAACA TCGAGAGCGT GAGCGTTCCG GGCTTCGGCC ACGAGGGCGC GTTCTCTCCC
GCCGGCTGTC GGGTGATGGC CGCCAAGATC AGCCTGATGG CGTGCCGGTG A
|
|---|
| Protein sequence | MRHFTQESPA MTGEVHGGDA FTARCSHSQT RFWLLDQLRP GDPSLHVAAR WRIAGRLDAE
ILTRAFRLLL DRHEALRTSI VGEGGRPVQR IAGTVPLAFS EIDLSGLPGD RLGEARAIAE
SEAGKPFDLA RAPLVRVTLL RLGRGDSLLL VTAHHSICDG WSMVVLAREF VAIYSALIRG
QVPALAPAAL HYADFAEWEI SPALAEAAER DLAFWARSLR DLIPFELPPD HPRRPGRERR
FAAETRPLSA DLGARMEAYA RAQGATPFVL ACTILFGLLS ARTGRGDIAV GTQVLGRDEI
ELEGVVGTFV NTLVLRTHVE AEQSFAERLA ATRRTILDAC DHALAPFDRV VQALAPCRDG
LRPPLVSVNV RMRPTPQATP SGGSSVGEPA PIRLVDLDYA PTGSFFDLDL ELAPGEAGWR
LICEYDAGLY AAETVAGLLA DFEQAARAAV GARLPDPAPL GSGGGGIAGA LEQASREAGQ
PEAEETAARA TPDAAPAPET APPLAGEAAG ELLPTIRTIW REMLGRPDLS DDEDFFAAGG
HSLLAARVVA RIEAATGRTV PLWSFFEAGT VARLCAFLGG EAAAGVRHRA LQEPTAQARP
GFTAIHHAAA DQELYRPLSE ALGADHPFAT LQLESRVPPH EETLERLAGA YRDAIEAAQP
QGPIRLVGFC RSGVLAFEIA RQFAQGGRDV ALVVLIDCWE PGYIRRFRPL ARMRVMAAYR
RGRLAALIRH VRRDGIGYLG SRAHLWFRSH RAWRGLRRAL NRVGLATPSP EDAFWQVTDE
LDALALAYEP RPHPGPVLIV RSESVPVGPA LDPMLGWRAH AENIESVSVP GFGHEGAFSP
AGCRVMAAKI SLMACR
|
|---|
| |