Gene Mchl_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4980 
Symbol 
ID7114978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5322054 
End bp5325248 
Gene Length3195 bp 
Protein Length1064 aa 
Translation table11 
GC content71% 
IMG OID643527674 
Productacriflavin resistance protein 
Protein accessionYP_002423673 
Protein GI218532857 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.418063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.190212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC AACGGCCCGC ACGCGGACCG GCGCGCGACG ATCCGCCGGG CCCGCCTCCG 
GCGGCCCTCT CCCCTGCGCC CGTGGCCTTG GGCCCTCAGG CCGCCCTGGT CGCCTTCGCG
GTGCGCCGGC CCGGCATCGT CCTGGCGCTG GTCCTGGCGC TCGCTATCTA CGGCATCGTC
GCCCTGGGTT CGGCCAAATA CGACGTCTTC CCGGAATTCG CTCCGCCCAC GGTGACGGTG
CAGACCGAGG CGCCCGGCCT CAACCCCGAG CAGGTCGAGA CGCTGGTGAC GCAGACGCTG
GAGGTCGCGA TCAGCGGCCT GCCAGGACTG GCGACGATGC GCTCGAACTC GATCCAGGGC
CTCTCGGTCA TCACCGCCAC CTTCGCCTCC GGCAGCGACA TCTACCGGGC GCGCCAGCTC
GTGAACGAGC GTCTGGCCTC CATCACCGCG CGGTTGCCGC AGGGCGTGCT GCCCCCCACC
ATGACGGCGC TGACCTCCTC GACGAGTTCG GTGCTCCTTA TCGGCCTGAC CTCCCCGACG
CAGTCGCTGA TGGACCTGCG CACGGTGGCC GACTGGCGCC TGCGTCTGCG CCTGCTCGCC
GCCCCCGGCG TCGGCGAGGT GCTGGTCTAT GGCGGCGATC TCCGCTCGAT CCGCATCCAG
GTCCGGCCGC AGGATCTGGT GCGCTTCCGC ATCGGCCTGA ACGACGTGCT CTCGGCCGGC
CGCAAGGCGA CGGGCGTGCG CGGGGCGGGC TTCGTCGATA CCGTCAACCA GCGCATCACC
CTGCAGACCG AGGGGCAATC CCTGACCCCG GAGGCGGTGG CGCGCACCGT GCTCATCAAC
GAGGGCGGGG CGAGCGTGGT GCTCGGCGAC GTCGCCGACG TGGCGGTGGC GCCGGAACCG
GCGATCAGCG CGGCTCTCGT CGATGGCAAA CCGGGCGTGC TGCTGATGGT CGGCGCGCAA
TACGGCGCCA ACACCCTCGA CGTGACGGCC GGCGTCGAGG CGGCGCTCGC CGAGATGCGC
CCCGGGTTGG AGCGCGACGG CACCACCCTG CGCACCGACC TGTTCCGCCC GGCGAGCTTC
GTCACGCAGG CCACCGACAA CGTGGTCCAG GCACTCGCCC TCGGCGGCAT CCTCGTCGTC
GTGGTGCTGT TCGTCTTCCT GGCCGATTGG CGCACGGCGC TGATCAGCGC CACGGCGATC
CCGCTCTCCC TGATCGGCGC GGTGCTGATG CTCGGCCTGT TCGGCCAGAG CCTCAACACG
ATGACGCTGG GCGGCCTCGC CATCGCCATC GGCGAGGTCG TGGACGACGC GGTGATCGGC
GTCGAGAACG TCATGCGCCG CCTGCGCGAG AACCGCCGCG CCGTCGCGCC CTTACCCGGC
GCGCGGGTGG TGCTCGACGC GATCCTGGAA GTGCGCGTCT CGGTCGCCTA CGCCACCTTC
GCGGTGCTGC TCGTGTTCCT GCCGGTGCTG GCGCTGACCG GCGTGCCCGG CCGGCTGTTC
GGCCCGTTGG CGCTGGCTTA CATCCTCGCC GTGCTGACCT CGCTCGCCGT GGCGCTGACG
GTCACGCCCG CGCTGGCCCG CCTGCTGCTC GCCGGGCGCA CCAACCTTCC GAGCCGAGAG
CCGCCGGTGA GCCGCCGCGT GCGGGGCATC TATGTCCGTG GGCTCGCGCG GCTCGACCGT
CACCCGCGTC TCGTCTTCGG CACCAGCCTC GCCCTGACGC TCGTCGCAGC CCTACCGGTG
CCGTTCTTCG GCGGCGTGTT CCTGCCGGAC CTGAAGGAGG GGCATCTCAT CCTGCACATG
GCCTCGGCCC CCGGCACCTC CCTTCTGGAG ACGCTGCGGC TCGGCGAGCG CATCACGGCG
GGGCTGAAGG CGGTGCCCGG CGTGCGCGCG GTGGCCCAGC AGGTCGGGCG CGCCGAAGCG
GGCTACGATC TCGGCGGCAC GCATGACAGC GAGATCCATA TCAATCTCGA ACCCGGCCTC
GACGGGGAGG GGCAGGAGCA GGCGGAGGCC GGCATCCGCG CGCTGATGGC GGCGACGCCC
GGCGCGAACT TCTCGCTCAA GACCTTCCTG ACCGAGCGCA TCGAGGAGGT CGTCTCAGGG
TTCACCGCGC CGGTCGTGAT CAGCGTCACC GGCACGAATC TCGACCGGAT CGAGGCCACC
GCCCGCGACG TGGCGCGCGA ACTCGCCGAG GTGCGCGGTG CGGCCGATGT CCAGCTCAAG
TCGCCGCCGG GCCTGCCCCA GGTCAATGTG AGCCTGCGCC CGACCGACCT GCGCCACTGG
GGCCTCGACG CGATCGAGGT CCTGGAAATT GTGCGCACGG CCTATCAGGG CGACATCGTC
GGCCAAGCCT ACGAGGGCAA CGCCGTGTTC AACGTCGTCG TGGTGCTCGA ACCGATTGTG
CGCACGCGCC TTTCGATGCT CGGCAACCTG CCGCTGCGCA CGCCGAGCGG AAGCTACATC
CGGCTCGCCC AGGTGGCCGA CATCTACGAG ACCGCCGGCC GCTACGCCGT CGGCCATATC
GGCGCGCAGC GGGTGCGGGT GGTGACCGCG AACGTGGAGG GGCGCGACGT CGCCTCCTTC
ACCGAGGCCG CGAAACGGAA GATCGCCCGC GAGGTCGCGC AGCCCTCGGG CATCGATATC
GGATTCGGGG GGGCGGCCGA GACGCAGGCC AAGGCGCGGC GCGAACTCGC GCTCTACGCA
GGTCTCGCCG GTCTCGGGAT CGTGCTCCTG CTCCTCGTCG TGACCGGCTC GCTGACCAAT
CTTGCCCTTG TCCTCGTCAA CCTGCCCTTC GCCTTCGTCG GCGGCGTGCT GGCGGTGGCC
TTGAGCGGCG CGGTGATCTC GCTGGGCTCG ATCGTCGGCT TCGTGACTCT GTTCGGCATC
TCGCTGCGCA ACACCATCAT GATGGTCGCG CATTACGAAC ATCTGGTGCT GGTGGAGGGG
CGGCCCTGGA ACCTCGCGGC CGCCATCGAG GGCGCCGCCG ACCGTCTCGT GCCGATCCTG
ATGACGTCCC TCGTCACCGG CCTCGGGCTG CTGCCGCTGG CGCTCGGTGC CGGTGAACCC
GGCCGGGAGA TAGAGGGACC GATGGCCCTG GTCATCCTCG GCGGCCTCGC GACCTCGACT
TTGCTCAACC TCGCCGTGCT GCCGATGCTG GCCCTGCGCT TCGCCCGGTT CAAGCCCGCG
GAAAGCGCAC TGTGA
 
Protein sequence
MLDQRPARGP ARDDPPGPPP AALSPAPVAL GPQAALVAFA VRRPGIVLAL VLALAIYGIV 
ALGSAKYDVF PEFAPPTVTV QTEAPGLNPE QVETLVTQTL EVAISGLPGL ATMRSNSIQG
LSVITATFAS GSDIYRARQL VNERLASITA RLPQGVLPPT MTALTSSTSS VLLIGLTSPT
QSLMDLRTVA DWRLRLRLLA APGVGEVLVY GGDLRSIRIQ VRPQDLVRFR IGLNDVLSAG
RKATGVRGAG FVDTVNQRIT LQTEGQSLTP EAVARTVLIN EGGASVVLGD VADVAVAPEP
AISAALVDGK PGVLLMVGAQ YGANTLDVTA GVEAALAEMR PGLERDGTTL RTDLFRPASF
VTQATDNVVQ ALALGGILVV VVLFVFLADW RTALISATAI PLSLIGAVLM LGLFGQSLNT
MTLGGLAIAI GEVVDDAVIG VENVMRRLRE NRRAVAPLPG ARVVLDAILE VRVSVAYATF
AVLLVFLPVL ALTGVPGRLF GPLALAYILA VLTSLAVALT VTPALARLLL AGRTNLPSRE
PPVSRRVRGI YVRGLARLDR HPRLVFGTSL ALTLVAALPV PFFGGVFLPD LKEGHLILHM
ASAPGTSLLE TLRLGERITA GLKAVPGVRA VAQQVGRAEA GYDLGGTHDS EIHINLEPGL
DGEGQEQAEA GIRALMAATP GANFSLKTFL TERIEEVVSG FTAPVVISVT GTNLDRIEAT
ARDVARELAE VRGAADVQLK SPPGLPQVNV SLRPTDLRHW GLDAIEVLEI VRTAYQGDIV
GQAYEGNAVF NVVVVLEPIV RTRLSMLGNL PLRTPSGSYI RLAQVADIYE TAGRYAVGHI
GAQRVRVVTA NVEGRDVASF TEAAKRKIAR EVAQPSGIDI GFGGAAETQA KARRELALYA
GLAGLGIVLL LLVVTGSLTN LALVLVNLPF AFVGGVLAVA LSGAVISLGS IVGFVTLFGI
SLRNTIMMVA HYEHLVLVEG RPWNLAAAIE GAADRLVPIL MTSLVTGLGL LPLALGAGEP
GREIEGPMAL VILGGLATST LLNLAVLPML ALRFARFKPA ESAL