Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4692 |
Symbol | |
ID | 7115260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4972248 |
End bp | 4974131 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643527390 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_002423394 |
Protein GI | 218532578 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.761206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA AAGCTATCGC CGACTACGCC GTGATCGGCG ATACCTGCAC CACGGCCCTG ATCGCCCGAG ACGGTTCCCT CGATTGGCTA TGCTGGCCCC GGCATGACGG GCCGGCCGTC TTCCTGGCCT TGCTCGACAG CGAGCGGGGC GGTGCCTGCC GCCTCGTCCT CGACGGCCTG ACCGAGATCA CCCGCCGGTA TCTGCCCAAC ACCAACATCC TCGAGACCAC CTTCGTCACC GCCACCGGCC GGGCAGTGCT CACCGACTTC ATGCCGCTTC ACCGGCACGA ATCGGTGCCG GAGGAGGGAC CGGACGGCCA AGCGCAAGCT CAGGTGGTCC GACGCCTCGC CTGCCGGTCC GGCCGCGTCT CCGGCCGCTG GCGGCTGCGC CCGAGCTTCG ACTACGCCCG CGCCCCGACT GAGGCGACGA CGGAGGGCGA GACCTGTATC CGCTTCCGCG GCGGCGGGGA CACCATCCGG GCCGTCTGCG CCGTGCCGCT CGCCCTCCGT GACGAGGAGG CCGAGGGCGC CTTCGCGCTC GGGGCGGGCG AACGCGCCGA CCTCGTGATC GCCCACGGCG AAAAGCACGG CGTGGACGGA GAAGGGCTAC CCGGCGCGGT GGATGATTCG CTTGCCGATA CACGGGCCTA TTGGGAGGAA TGGTCGGGCC GCTGCACCTA CGAGGGGCCC TACCGAGAGA CGGTCCTGCG CAGCGCGTTG ACCCTGAAGC TGCTGACGCA CGGCCCTTCC GGCGGCATCG TCGCCGCTGC GACGGCGGGG CTGCCCGAGG CAGTGCCGGG CAACCGCAAC TACGATTACC GCTACGTCTG GATGCGGGAT GCGAGCTTCA CCGTCACCGC CTTCGTCAAT CTTGGCTACC AGCGCGAAGC CGCCGAGTTC CTGCGCTTCC TGCGCGAGGC CGATACGAGC CGGGGGCGCG ACCTTCACCT GATGTACGCC CTCGACGGTG CGGTGCCGGA GGAAGAATTC CTCGATCACC TGCGCGGCTG GCGCGGCATC GGTCCGGTGG GAATCGGCAA CGCGGCGGCG GATCAGGAGC AGTACGACAT CTACGGCGAG TTCTTGGTGG CCCTCCACGG CTACCTCGAA GCGGTGGAAT ACGACCCGCC GGTCAAGGTC AACGACCACC TGCCCGAGGC GCTTGGCCAT CTCACCGACC ACATCCTGCG GGCTCGCCAT GCGGCCGACC ACGGCCTGTG GGAGATGCGC ACGGAGAAGC GCCAAAGCGT GCACACCAAG GCGATGCTCT GGGTCGGTCT CGACCGCGCC GTGCAGATCG CCCGCGCCGA CCCGAAGCAC CGTCTCGCCA GTCCGGACAC GATCGCCGGG TGGGAGCGGG CGGCGGCCGA GATCCGAGCG GAATACCACG CGCGAGGCTG GAACGCGGCG CCCGGCGCCT ACACCATGGC CTACGAATCG GACGATCTCG ATGCGGCAGT GCTGCGCACC GTGCTGTTCG GCGCCTTCGA TCCGCACGAT CCGCGCGTCG CGAAAACCCT GGAGCGGGTC GGCGAGGAAC TCGGCGCGGG CGACCTCATC TACCGCTACC GGATGGACGA CGGGTTGGAG GGCGACGAGG CGACCTTCAC CGCCTGCTCC TTCTGGCGGG TCGGCTGTCT GGCGCTGGCT GGCCGCAACG ATGAGGCCAC CGCCCTGTTC GAGCGGCTGC TGTCGCGGGG CAACGATCTC GGCCTGTTCG CCGAGGAGAT CGACGCGGAA ACGGGCGAGC AGCGCGGAAA CGTACCGCAG GGCTTCACCC ATATGGCGGT GATCAACCAC GCCGTCCGCC TCGCCGCGGC CGACCGCGAG ACCCCGACCG ACGAGCCGGA TTGCCGGGCA GAGGCCGACG CCGTCCCGGC CTGA
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Protein sequence | MTDKAIADYA VIGDTCTTAL IARDGSLDWL CWPRHDGPAV FLALLDSERG GACRLVLDGL TEITRRYLPN TNILETTFVT ATGRAVLTDF MPLHRHESVP EEGPDGQAQA QVVRRLACRS GRVSGRWRLR PSFDYARAPT EATTEGETCI RFRGGGDTIR AVCAVPLALR DEEAEGAFAL GAGERADLVI AHGEKHGVDG EGLPGAVDDS LADTRAYWEE WSGRCTYEGP YRETVLRSAL TLKLLTHGPS GGIVAAATAG LPEAVPGNRN YDYRYVWMRD ASFTVTAFVN LGYQREAAEF LRFLREADTS RGRDLHLMYA LDGAVPEEEF LDHLRGWRGI GPVGIGNAAA DQEQYDIYGE FLVALHGYLE AVEYDPPVKV NDHLPEALGH LTDHILRARH AADHGLWEMR TEKRQSVHTK AMLWVGLDRA VQIARADPKH RLASPDTIAG WERAAAEIRA EYHARGWNAA PGAYTMAYES DDLDAAVLRT VLFGAFDPHD PRVAKTLERV GEELGAGDLI YRYRMDDGLE GDEATFTACS FWRVGCLALA GRNDEATALF ERLLSRGNDL GLFAEEIDAE TGEQRGNVPQ GFTHMAVINH AVRLAAADRE TPTDEPDCRA EADAVPA
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