| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4574 |
|---|
| Symbol | |
|---|
| ID | 7117969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4844181 |
|---|
| End bp | 4847153 |
|---|
| Gene Length | 2973 bp |
|---|
| Protein Length | 990 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643527273 |
|---|
| Product | D-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_002423278 |
|---|
| Protein GI | 218532462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0207313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGCGA GCGCGAAACC GGGCGAGGCA GCGTTCGAGG CACCGGCCTC CAGCGCGCGG
GCGAAGGCCC GCAACGCGGC CGGATTGCCG CGCAAGCTTG CGGAGGTGCT GCAGGGCGAG
GCCCGCTTCG ACGCCTTCAC TCGCGGACGC TACGCGACCG ACGCCTCGAT CTACCAGATC
ATGCCGGCGG GCGTGGTTTT TCCCAAAAGT GCCGCCGACA TCGCCGCGAC GCTGAAGGTG
GCGGCCGACT ACGACGTCCC CGTGATCCTG CGCGGTGGCG GCACCTCGCA GAACGGCCAG
CCGATCGGCT CCGGCCTCGT GATCGATTGC TCGCGCCACT TCAACGGCGT GCTCGCCTAC
GACGCGGAAG GCGGCACGGT CACCGTCGAG CCCGGCCACG TGCTGGAGCG CCTCAACGCC
CGGCTGAAAG CTGACGGCTG GTTCTTCCCC GTCGAGCCCT CGACCGCGAC CCGCTGCACC
ATCGGCGGCA TGGCGGGCAA CAATTCCTGC GGCGCCCGCT CGCTCCGCTA CGGCAAGATG
AGCGACAACG TGCTCAGCAT CGAGGCGCTG TTCCACGACG GCGCCGCCTT CGGCTTTGGG
CTCACCGGCA ACGCGGCGAG CGCCGTGACC GGCGGCGCGC GGGCGGAGGA TCTGGCGCGG
CGGATGCTTG CACTCGCCGA CGCGCACCGT GACGAGATTG CGGAAAAATA CCCGAAGGTG
CAGCGGCGGG TCGGCGGCTA CAACCTCGAT TCCCTGATCG AACCGCGCCC GAACCTCGCC
CACCTCCTCG TCGGCTCGGA GGGGACGCTC GCCGCCACCA CCGCGGTGAC GCTCAAGCTC
TCCCGTCTGC CGGCCCACCG GGCCATGGGC GTGTGCCACT TCCCCTCGTT CCGCGCGGCG
ATGGAGACGA CGAAGGCGAT CGTCGCCCTC GACCCCGTCG CGGTCGAACT CGTCGACAAC
AACGTGCTCG TGCTCGGCGC CGACATCCCG CTGTTCCGCA CGACCCTGGC CGACATCACG
CGGGGCCAGC CCAACTGCCT GCTGCTGGCC GAGTTCGCGG GCGACGACCT CGCCGCGCTG
AAGCGCGACC TCAAGCGCCT CGACCAATGC ATGGCCGATC ACGGCTTTCC CGACGCGGTC
GTCGAGGTGG TGGAGCCGAA CCGCCAGAAG GCGGTCTGGG AGGTGCGCGA GGCCTGCCTC
AACATCATGA TGTCGATGAA GGGGGACGCC AAGCCCGTCT CCTTCATCGA GGATTGTGCC
GTTCCGCTGG AGCATCTGGC CGACTACACC GACGCGGTCA CCGCGGTGTT CTCGCGGCAC
GGCACCCGCG GCACGTGGTA CGCCCACGCC TCCGTCGGCT GCCTGCATGT GCGCCCGATC
CTCGACATGA AGCAGGGCGG CGACGTCCGG AAGATGCGCG CCATTGCCGA GGAGACGGCG
GAGCTGGTGC GCCGCCACAA GGGCTCCTAC TCGGGCGAGC ACGGCGACGG CATCTCACGC
TCGGAGTTCG TGGAGCCGCT GTTCGGCGCG AAACTTACCC GCGCCTTCGA GACGGTGAAG
GACGGCTTCG ATCCCGACAA CCGCCTGAAC CCGAACAAGA TCGTCCGCCC GCTCAAGATG
GACGACCGCA CGCTGATGCG CTTCGGCCCC GACTACGCGG TGAGCGCCCC GCAGAAGACG
GCGCTGGACT GGTCGGATTG GGGCGGGTTC GGCCCGGCGG TCGAGATGTG CAACAACAAC
GGCACCTGCC GGAAGCTCGC CGGCGGCGCG ATGTGCCCCT CCTACCGCGC CACCCGCGAC
GAGCAGCACC TCACCCGCGG ACGCGCCAAC TCGCTGCGCC TCGCGATCTC GGGCCAGCTC
GGGCCGGACG CGTTCCTGTC GCCTGAGATG AAGCGCACGA TGGATCTGTG CGTGTCGTGC
AAGGCCTGCC GCCGGGAATG CCCGACCGGC GTCGACATGG CCAAGATGAA GGTCGAGTTC
CTGCACCACT ACCATGCCCG GCACGGCCTG CCGCTGAAGG AGCGGCTGGT CGCCGAGATG
CCGCGCTACG CCGGTGTCGC CGCCGCCCTC GCGCCGCTGC TCAACCTGCG CAACCGCTAC
CCGGCACTCG CCCGGTTCGG TGAGGCATGG ACCGGCTTCT CCGCCCGCCG CTCGCTGCCC
GAATGGCGCC GGCCCTGGCG GGAGACCGGC GAGGTTGCCC ATCCCGAGGA CGTGGCGGGT
GACCACCGCG ACCTCATCCT GTTCGGCGAC ACCTTCAACC GCGCCTTCGA GCGCGAGAAT
CTGGAAGCCG CCGAGCGGGT GCTGCGCGCG GCCGGCTACC GCCTGCACCG CGTCGTCGCC
CATGAAGGCC GCCGCCCGCT CTGCTGCGGC CGCACCTATC TCGCCTCCGG CCAGACCGAC
CGGGCGCGGG CGGAGGCTCG GCGCACGCTC GACACGCTCC TGCCCTTCGT GCGGGCCGGC
GCCCGCGTGG TCGGCCTGGA GCCGTCCTGC CTCCTCACCT TCCGCGACGA GTTTTTGTCC
CTGCTGCCGC GGGCGGAGGC GAGCGAATTG GCCCAGAGCG CCCTGCTGTT CGAGGAGCTG
CTCGCCACCG ATCTCGCCGC TGGCCGCATC AGCCTCCCGC TCGCCGACCA GGGCGGCCGG
GTCGCCCACC TGCACGGCCA TTGCCACCAG AAGTCGTTCG GAGTGATGGG CTCTGTGGAG
ACGGTGCTGC GCACCGTGCC GGGGCTCGAC GTTCGGGTCA TCGAATCGAG CTGCTGCGGC
ATGGCCGGCG CCTTCGGCTA CGGCAAGGAT ACGATCGACG TCTCCTTCGC CATGGCCGAG
CTGTCGCTGT TCCCGGCGCT CCGGAAGGCG TCCGCCGACG ACCTCGTGGT CGCCGACGGC
ACGAGCTGCC GCCACCAGAT CCACGACGGT CTCGGCCGCG ACGCGATCCA CGTCGCCCGC
GTGCTCGATG CGGCCCTGAC GCCGGGGCGC TGA
|
|---|
| Protein sequence | MGASAKPGEA AFEAPASSAR AKARNAAGLP RKLAEVLQGE ARFDAFTRGR YATDASIYQI
MPAGVVFPKS AADIAATLKV AADYDVPVIL RGGGTSQNGQ PIGSGLVIDC SRHFNGVLAY
DAEGGTVTVE PGHVLERLNA RLKADGWFFP VEPSTATRCT IGGMAGNNSC GARSLRYGKM
SDNVLSIEAL FHDGAAFGFG LTGNAASAVT GGARAEDLAR RMLALADAHR DEIAEKYPKV
QRRVGGYNLD SLIEPRPNLA HLLVGSEGTL AATTAVTLKL SRLPAHRAMG VCHFPSFRAA
METTKAIVAL DPVAVELVDN NVLVLGADIP LFRTTLADIT RGQPNCLLLA EFAGDDLAAL
KRDLKRLDQC MADHGFPDAV VEVVEPNRQK AVWEVREACL NIMMSMKGDA KPVSFIEDCA
VPLEHLADYT DAVTAVFSRH GTRGTWYAHA SVGCLHVRPI LDMKQGGDVR KMRAIAEETA
ELVRRHKGSY SGEHGDGISR SEFVEPLFGA KLTRAFETVK DGFDPDNRLN PNKIVRPLKM
DDRTLMRFGP DYAVSAPQKT ALDWSDWGGF GPAVEMCNNN GTCRKLAGGA MCPSYRATRD
EQHLTRGRAN SLRLAISGQL GPDAFLSPEM KRTMDLCVSC KACRRECPTG VDMAKMKVEF
LHHYHARHGL PLKERLVAEM PRYAGVAAAL APLLNLRNRY PALARFGEAW TGFSARRSLP
EWRRPWRETG EVAHPEDVAG DHRDLILFGD TFNRAFEREN LEAAERVLRA AGYRLHRVVA
HEGRRPLCCG RTYLASGQTD RARAEARRTL DTLLPFVRAG ARVVGLEPSC LLTFRDEFLS
LLPRAEASEL AQSALLFEEL LATDLAAGRI SLPLADQGGR VAHLHGHCHQ KSFGVMGSVE
TVLRTVPGLD VRVIESSCCG MAGAFGYGKD TIDVSFAMAE LSLFPALRKA SADDLVVADG
TSCRHQIHDG LGRDAIHVAR VLDAALTPGR
|
|---|
| |