| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4140 |
|---|
| Symbol | |
|---|
| ID | 7115103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4366322 |
|---|
| End bp | 4367632 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643526854 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002422862 |
|---|
| Protein GI | 218532046 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA CCGGCATGTT CACGCTCCGG GTCTGGGTGG CCGCCGCAAC GCTGTCCGCC
GCGTGCCCGC CCGTCATTTC GACGGCGTTC GCGCAGGCCG AGCCGACGGG CCCCCCCGTC
GTCGGCATCA TCGCCGCGCG CAAGGAGCCG ATCACCCAGA CGGAGCAGTT CATCGGCCGC
ATCGAGGCGA AGCAGCGTGT CGACATCGTC GCCCGGGTGA CGGCGTTCAT CGAGAAGCGG
CTCTTCGTCG AGGGCACGGA TGTCGAGGAA GGCGCGCTCC TCTACCTTCT CGAGCAGGGC
CCGTTCCAGG CGGTCGTGGC CGCGCAGAAG GCGCAGATTG CGCAGGTCGA AGCGCAATTG
GAGAACGCGC GTCTCACGAC GCAGCGCGCC CGAACCCTGC TCGGCGGGCC GGCCGGGCAG
CAATCGACCT ACGACGCGGC CCTCGCGAAC GAGCGCGCCT TGGAGGCGCA GCTCCAAGGC
GCACAAGCTC AGCTCGACAC GGCGCAGATC AATCTCGGCT ACACGGAGAT CCGCGCGCCG
ATTGCGGGCC AGATCGGGCG CACGTCCCTG ACGATCGGCA ACGTCGTCGG GCCGGGCTCC
GGGGTGCTGA CGACGATCAT CAGCCAGGAC CCGATGTTCG TGACGTTTCC GGTGCCGGTC
CGTGAAGCGA TCAATCTGAG AGCGCGCTAT GGGCCGACGG GCGGATTCGG CGCCGTCCTG
ATCCGGGCAC AACTCCCGGA CGGCCGCTTC TACGATCACA CCGGGACGCT CGATTTCGTC
AACAACACCA TCGCGACGAA TACGGACACG ATCCTGCTTC GCGGCGTGCT GCCGAACCCT
CCGATCTTCG GTCAAACCCG CAGCTTGCTC ACCCTTCGTG AACTCACGGA TGGCGAGTTC
GTGACCGTGT TCCTCGAGGG CGTCGAGCCG GTCGAGGTGG TCGCGATTCC CCGCGCCGCC
GTCCTGGCCG ACCAGCGGGG CAGCTACGTC TACGTGATCG GGCCGGGGAA TAAGGCCGAG
GAGCGTCGGA TTCAGCTCGG CCAGTCGAGC ACGACGCTCG CGGCGGTGAC GAGCGGTCTC
AAGGTCGGAG AGCAGGTCAT CGCCGAAGGC TTGCAGCGGG TCCGCGCGGG CGAGACGGTC
TCGCCCAAAC CCGCCGACGC CATTCTGCAG AGGATGATGC GGAATTCGGC GGTGAACGCG
GACCGCGCAG GGCCGGCTGC GTCCGCTTCG CCGCCGGCCG GACAAGCTCC GACCGGAGCC
GCCAGCGGCG CCGGTCCGAG CGCGAGCGGC AGCCCGAACA GCCGGCGCTA G
|
|---|
| Protein sequence | MTMTGMFTLR VWVAAATLSA ACPPVISTAF AQAEPTGPPV VGIIAARKEP ITQTEQFIGR
IEAKQRVDIV ARVTAFIEKR LFVEGTDVEE GALLYLLEQG PFQAVVAAQK AQIAQVEAQL
ENARLTTQRA RTLLGGPAGQ QSTYDAALAN ERALEAQLQG AQAQLDTAQI NLGYTEIRAP
IAGQIGRTSL TIGNVVGPGS GVLTTIISQD PMFVTFPVPV REAINLRARY GPTGGFGAVL
IRAQLPDGRF YDHTGTLDFV NNTIATNTDT ILLRGVLPNP PIFGQTRSLL TLRELTDGEF
VTVFLEGVEP VEVVAIPRAA VLADQRGSYV YVIGPGNKAE ERRIQLGQSS TTLAAVTSGL
KVGEQVIAEG LQRVRAGETV SPKPADAILQ RMMRNSAVNA DRAGPAASAS PPAGQAPTGA
ASGAGPSASG SPNSRR
|
|---|
| |