Gene Mchl_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4122 
Symbol 
ID7114429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4346445 
End bp4347530 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID643526839 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002422847 
Protein GI218532031 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGA GATGGGTAAT CGGTCTGACC GGTTTGGCCC TTGCGGCCTG CTCGCCGGCC 
GAGACGGCCG TGAACCCGGA GCCGCCCCTC GTCCAAGTGA CCGAGGTCGC CCCAAGCTCC
GGCGTCGTGT CCCGCTACAC CGGCGTGATC AGGGCCCGCA CCGAGAGCAA CCTTGGCTTC
CGGGTAGGGG GCAAGATCTT CGAGCGTCTC GTCGATCCGG GTGACCGCGT GCACCTCGGT
CAGCCGTTGA TGCGCCTCGA CCGGACCGAC TTCACCCTCG CCCTCAATGC CGCGCGCGCC
TCCGTCGAGG CTGCCCGCGC CCAGATGATC AAGGCCAAGG CCGACGAGGA GCGTAGCCGT
AAGCTCGTGG CCGACGGCTG GACCTCGAAG CAGACCTACG ACCAGAACAA GGGTGCGGCC
GATGCAGCCA TCGCCCAGTT CGCCAATGCC GAAGCCCAGG CCGGCCAGAT CGGGAACCAG
GCAGGTTACG CCGAGCTCAA GGCCGATGCC GACGGCGTGG TGATGGAGGT TCCCTCCTAT
CCCGGGGAAG TGGTCGCTGC GGGCCAAACC GTGGTCAGGC TGGCGCGCGA CGGGTCTCGG
GAGGCGGAGA TCTTCTTGCC CGAGGCAAGC CGTGGTCTAG CCAAGGGCGA AGCCAAGGCA
ACGCTCTATG CCGAGGGCGA AGCAACCTAC CCCGCTCGCT TGCGGGAGTT GTCCGCCATT
GCCGATCCGG CCACTCGAAC TTACCGGGCG CGCTACATCC TTTCGGGTGG CGGTGAAGAC
GCTTCGCTCG GGGCGACCGT CACCCTGCAG CTCAAATCCC CTGAGGCTGT CCGCACCGCG
ACGGTCGAGG TGCCCCTCGC TGCCCTGTTC GACCAGGGGC GCGGCACCTC GGTTTGGCGC
TATGACGCCG CCAGCGAGAC GGTGAAGCCG CAGGCCGTGC AGGTGGCCCG CATGGGCGAG
GAGCGCGCCG AAGTCGCCGC CGGCCTCAAT CCGGGCGACC GGATCGTGGC TCTTGGCGCC
CATCTGCTGA AGGCCGATCA GAAGGTACGC CGAGCGCCCA CCAGCATGAC GGGGGTGGTG
CGATGA
 
Protein sequence
MDARWVIGLT GLALAACSPA ETAVNPEPPL VQVTEVAPSS GVVSRYTGVI RARTESNLGF 
RVGGKIFERL VDPGDRVHLG QPLMRLDRTD FTLALNAARA SVEAARAQMI KAKADEERSR
KLVADGWTSK QTYDQNKGAA DAAIAQFANA EAQAGQIGNQ AGYAELKADA DGVVMEVPSY
PGEVVAAGQT VVRLARDGSR EAEIFLPEAS RGLAKGEAKA TLYAEGEATY PARLRELSAI
ADPATRTYRA RYILSGGGED ASLGATVTLQ LKSPEAVRTA TVEVPLAALF DQGRGTSVWR
YDAASETVKP QAVQVARMGE ERAEVAAGLN PGDRIVALGA HLLKADQKVR RAPTSMTGVV
R