Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3894 |
Symbol | sdhA |
ID | 7114903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 4088064 |
End bp | 4089881 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643526624 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002422634 |
Protein GI | 218531818 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.197251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCA ACGGAACGAA CGGCGGCGCG CCCGCCTACG CCATCACCGA CCACACCTTC GACGTGGTGA TCGTCGGCGC CGGCGGCGCG GGTCTGCGCG CCACGGTCGG CTGCTCCCAG GCCGGGCTTC GCACCGCCTG CATCACCAAA GTCTTCCCGA CCCGCTCGCA CACCGTGGCG GCGCAGGGCG GCATCTCCGC CTCGCTCGGC AATATGGGGC CGGACGATTG GCGCTGGCAC ATGTACGACA CCGTGAAGGG CTCGGACTGG CTCGGCGACC AGGACGCGAT CGAGTACCTC GTTCGCAACG CGCCCGCCGC CGTCTACGAA CTCGAGCACT GGGGCGTGCC GTTCTCCCGC ACGGACGAGG GCAAGATCTA CCAGCGCCCG TTCGGCGGCA TGACCACCGA TTACGGCAAG GGCACCGCCC AGCGCACCTG CGCCGCGGCC GACCGCACCG GCCACGCCAT GCTCCACACG CTCTACGGGC AGGCGGTGAA GAACAAGACC CAGTTCTTCA TTGAGTACTT CGCCCTCGAC CTGATCATGG ACGAGGACGG CCGCTGCCGC GGCGTGATGG CGATCGATCA GGCCACCGGC GAGATCCACC GCTTCCGCGC CCAGCAGACC ATCCTCGCCA CCGGCGGCTA CGGCCGCGCC TACTTCTCGG CGACCTCGGC GCATACCTGC ACCGGTGACG GCAACGCCAT GGTGCTGCGC GCCGGCCTGC CGCTGCAGGA CATGGAGTTC GTGCAGTTCC ACCCCACCGG CATCTACGGC GCCGGCTGCC TCATCACGGA AGGCGCGCGC GGCGAGGGCG GCTACCTCAC CAACTCCGAG GGCGAGCGCT TCATGGAGCG CTACGCCCCC TCGGCCAAGG ACCTCGCCTC CCGCGACGTG GTCTCCCGCT CCATGACCAT GGAGATCCGC GACGGCCGCG GCGTGGGCAA GGAAGGCGAC CACATCTTCC TGCATCTCGA CCATCTCGAC CCGAAGATCC TGCACGAGCG CCTGCCCGGC ATCTCGGAGA GCGCAAAGAT CTTCGCGGGC GTGGACGTGA CCAAGGAGCC GATCCCGGTC CTGCCGACGG TCCACTACAA CATGGGCGGC ATCCCGACGA ACTTCCACGG CGAGGTGCTG ACCCTGAAGA ACGGCAACCC CGACACGGTG GTGCCGGGCC TGATGGCGCT CGGCGAGGCG GCCTGCGTCT CGGTGCACGG CGCTAACCGC CTCGGCTCGA ATTCGCTGAT CGACCTCGTG GTGTTCGGCC GCGCCGCGGG CCTGCGTTGC GCCGACATCG TCGAGCCCGA CGCCCGCCAG CCGGAACTGC CGAAGGGCTC GGCCGACAAG GCGCTCGCGC GCCTCGACCG CTTCCGCTAC GCCGACGGCG GCACTCCGAC CGCGCAGCTG CGCGACCGGA TGCAGCGGAC GATGCAGAAC AACTGCGCCG TCTTCCGCAC CGGCGAGGTG CTGGAGGAGG GCAAGGGCCT GATTCACGAG GTCTGGCGCG GCGTCTCCGA CATCGCCATC ACCGACCGTT CGCTGGTGTG GAACACCGAC CTGCTCGAGA CCCTGGAATT CGACAACCTG ATCGGTCAGG CGGTCGTGAC CATGGAATCG GCGGTCAACC GCAAGGAAAG CCGCGGCGCG CATGCCCGCG AGGACTTCCC CGACCGCGAC GACAAGGAGT GGATGAAGCA CACGCTCGCG TGGCTCGACC AATCCAAGCA CGGCGTCGAG ATCGATTACC GTCCGGTCCA CACCTACACG ATGTCGAACG ACATTCAGTA CATCGAGCCG AAGGCGCGGG TGTACTGA
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Protein sequence | MASNGTNGGA PAYAITDHTF DVVIVGAGGA GLRATVGCSQ AGLRTACITK VFPTRSHTVA AQGGISASLG NMGPDDWRWH MYDTVKGSDW LGDQDAIEYL VRNAPAAVYE LEHWGVPFSR TDEGKIYQRP FGGMTTDYGK GTAQRTCAAA DRTGHAMLHT LYGQAVKNKT QFFIEYFALD LIMDEDGRCR GVMAIDQATG EIHRFRAQQT ILATGGYGRA YFSATSAHTC TGDGNAMVLR AGLPLQDMEF VQFHPTGIYG AGCLITEGAR GEGGYLTNSE GERFMERYAP SAKDLASRDV VSRSMTMEIR DGRGVGKEGD HIFLHLDHLD PKILHERLPG ISESAKIFAG VDVTKEPIPV LPTVHYNMGG IPTNFHGEVL TLKNGNPDTV VPGLMALGEA ACVSVHGANR LGSNSLIDLV VFGRAAGLRC ADIVEPDARQ PELPKGSADK ALARLDRFRY ADGGTPTAQL RDRMQRTMQN NCAVFRTGEV LEEGKGLIHE VWRGVSDIAI TDRSLVWNTD LLETLEFDNL IGQAVVTMES AVNRKESRGA HAREDFPDRD DKEWMKHTLA WLDQSKHGVE IDYRPVHTYT MSNDIQYIEP KARVY
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