Gene Mchl_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3848 
Symbol 
ID7114857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4055559 
End bp4056362 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content47% 
IMG OID643526578 
ProductABC-2 type transporter 
Protein accessionYP_002422588 
Protein GI218531772 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.800854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC ACACAGAGCG ACCTAAAGTT TCGTCTTACA CGCAAAGTCA TATTGACGTG 
TATTTGCGTG TTCTGAGCGC CCTGATGTTG CGCGATATGC GCAGTCGCTT CGGTGGGAGC
TACTGGGGAT ATCTCATACA GGTCCTATGG CCTTGCGTGC ATTTGGCTAT CATCGCCGGA
GCAATGAGCT TCCGCGGAAT GAAATCGCCT ATGGGCGATG ATACTTTAAT TTTTATCGCC
ACGGGCGCTG TTCCGGCCCT AGCCTTCCAA TATGTATCAA GAGAAGTGAT GAAAGGATAT
CTGATACATA AGCCTTTGAC GTATTTTCCT CAGGTTAAGC GATTTGATAC CGTCGTTGCC
CGCATCCTTG TCGAGATAGT CAGCAGTTTT ATGGGTGGTC TGCTGGTTAT AATCGTACTG
TTCTTGCTCG GATCTGACCC CATACCCGCC GACATGACGA TGGCCATCAC TGGATATCTC
GCGGCAATCG GCTTGGGGAT AGGTATTGGA ACCATCAATG TCGGAATATG CTCTGTCTTC
CCCGGGTGGG CTCTCGGTTA CATTCTTGTT ACCATAACGG TTTATATGAC GAGCGGAGTA
TATTTTCTGG CAGTTTTTAT GCCTGATGAG ATTTATCACT ATATGAAATA CAATCCGGTT
ACGCAGTTAA TCGAATGGGT TCGTTTGGCG TATAATCCCT CTCTGCCTAT AGAAATAGAT
TACCTTTATA TTTTCGGATG GGTGTTTGGA AGTTTGACTG TCGGTCTTTT AATGGAGCGA
TATGTCGTTA GGGCTCAACA GTAG
 
Protein sequence
MTTHTERPKV SSYTQSHIDV YLRVLSALML RDMRSRFGGS YWGYLIQVLW PCVHLAIIAG 
AMSFRGMKSP MGDDTLIFIA TGAVPALAFQ YVSREVMKGY LIHKPLTYFP QVKRFDTVVA
RILVEIVSSF MGGLLVIIVL FLLGSDPIPA DMTMAITGYL AAIGLGIGIG TINVGICSVF
PGWALGYILV TITVYMTSGV YFLAVFMPDE IYHYMKYNPV TQLIEWVRLA YNPSLPIEID
YLYIFGWVFG SLTVGLLMER YVVRAQQ