Gene Mchl_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1888 
Symbol 
ID7113616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1949756 
End bp1950904 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content72% 
IMG OID643524652 
Productcytochrome oxidase assembly 
Protein accessionYP_002420679 
Protein GI218529863 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.611675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT CGACCAATCC GACCCTCGAC CGCTTCGACG CCGTCCCGGC GGCCTCCTAC 
CGCCCCGGGC ACGGCGCGGT GCGCGCGTGG CTCTATCTGC TCGCCGTGCT TGTCGTGGCG
ATGGTCGCCG TCGGCGGCGC GACGCGGCTC ACCGGTTCGG GCCTCTCGAT CACCGAGTGG
CGGCCGGTGA CCGGCGTGGT GCCGCCGCTC GACGCCGCCG ACTGGGCGGT GGAGTTCGAC
AAGTACCGCG ACACGCCGCA GTACCGCATC CTCAACCAGG GCATCGGGCT CGACGGCTTC
AAGACGCTCT ACTGGTGGGA ATGGGGGCAT CGCCTGCTCG GGCGGATCGT CGGCCTCGTG
TTCTTCCTGC CATTTGCGTG GTTCTGGGCT CGCGGCATGC TCGGGCGTCG CCTCCTCACC
GGCCTCCTCG GCCTCGGCCT GCTCGGCGGG CTTCAGGGCG CGATCGGCTG GATCATGGTG
GCCTCGGGCC TCCAACCCGG CATGACGGCG GTGGCGCCGC TCAAGCTCGC CCTGCACCTC
ACCACCGCGA GCCTGATCCT CGCCGGCCTC GTCTGGCTCG CCGCTGGCAC CCGCCCTCGG
GCGCTCGCTC CGGCGCCCGA ATCGGTGCGG GTCGTCGCCT GCCTGTTGCC GGCCCTCGTC
CTGGTTCAGA TCTGGCTCGG CGGGCTCGTG GCCGGCTCGA AGGCGGGCCT CCTCTACAAC
ACTTGGCCGG ACATGGACGG CGTTCTCGTG CCGCCGGCCC GGGTGCTGTT CGACAAGGTG
CCCTTCATCG AGAACTTCAT CGACAACCTC GCCTTGGTGC AGTTCAACCA CCGCCTCTTC
GCCTATCTCG TCGTTGCGGT GGCCATCGCC CACGCGATCC AGGCCGCCCG TACGGCGTCC
GGCAGCGCCG CGGCGGGCCG GGCGATGGGC GTGGCGGCGC TGGCAACGGC GCAGATGGGT
CTCGGCATCG CGACCCTCCT GCTGCATGTG CCGCTCTGGG CCGGGCTCGC GCATCAGGTC
TTCGCCATGG CGGTGCTGAT CATGGCGACC GTCCATGCTC GCCTCGCCCG CGGTGTGCCC
GCCGCCGCCG CGCCCACGGG GGCGGAGGTG CCGATCGGTC TGGAGGCGCT CGCCGGCCGC
GGCGCCTGA
 
Protein sequence
MRLSTNPTLD RFDAVPAASY RPGHGAVRAW LYLLAVLVVA MVAVGGATRL TGSGLSITEW 
RPVTGVVPPL DAADWAVEFD KYRDTPQYRI LNQGIGLDGF KTLYWWEWGH RLLGRIVGLV
FFLPFAWFWA RGMLGRRLLT GLLGLGLLGG LQGAIGWIMV ASGLQPGMTA VAPLKLALHL
TTASLILAGL VWLAAGTRPR ALAPAPESVR VVACLLPALV LVQIWLGGLV AGSKAGLLYN
TWPDMDGVLV PPARVLFDKV PFIENFIDNL ALVQFNHRLF AYLVVAVAIA HAIQAARTAS
GSAAAGRAMG VAALATAQMG LGIATLLLHV PLWAGLAHQV FAMAVLIMAT VHARLARGVP
AAAAPTGAEV PIGLEALAGR GA