| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1758 |
|---|
| Symbol | ampC |
|---|
| ID | 7114553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1813213 |
|---|
| End bp | 1814376 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643524522 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_002420549 |
|---|
| Protein GI | 218529733 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.858626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGC GCGTGCTGGC CGCCATCGTC CTGAGCGGCT TACCGCATGT CACGGCGCCC
GCTCTGGCTG CCGACCCGTC GGCGCGGGTC GCCGCCGCGG TCGAGCAGGC CTACCGCCCG
CTCATGAAAG CGTACGACGT GCCCGGAATC GCCGTCGCCG TCACCCGCGC GGGGCATTCC
GCCGTCTTCG CCTTCGGGCT CGCCGACCGG GAGCGGCAGC GGCCGGTGAC ACGCGACACG
CTGTTCGAGA TCGGCTCGGT CAGCAAGACC TTCACGGCGA CGCTCGTCTC CTACGCGCAG
GGACTCGGCC GGCTCTCGCT CGACGATGCG CCGAGCCGGT TCCTGCCGTC GCTGCGGGGC
AGCGCGCTCG ATCGCATCAG CTTGCTCGAT CTCGGCACCT ACAGCGCGGG CGGCCTGCCG
CTGCAATTTC CCGATGCGGT GACCGACGAG GCGGCGATGA TCGCCTACTT TCGCCGCTGG
CAACCCTCCG CGCCGCCCGG GACGCAGCGG CTCTATTCAA ATCCCAGCCT CGGCCTGTTC
GGAGCGGCCG CCGCCGCGGC CATGGGCGGC GACTTCGTCG AGATGATGGA AACCCGGCTG
TTTCCGGGGC TCGGCCTGAA GCACAGCTTC ATCCGCGTGC CAGCGTCGGA GAGCGAGCGC
TACGCCTGGG GCTACGGCAA GGACGGCGCG CCGATCCGGG TCAATCCGGG CGTCCTCGAC
GGGGAGGCCT ACGGCGTCAA ATCCAGTGCC GCCGACATGA TCCGCTTCGT CGAGGCCCAT
CTCGATCCCA CCCGTCTCGA CCCGCCGATA CGGCAGGCGG TTCAAGGTAC GCAGATCGGG
TATTTCAGGG TCGGCGCGAT GGTGCAGGGG CTCGGCTGGG AGCAGTTTCC CTATCCGATC
TCGCTGGGGC GCCTTCAGGC CGGCAATGCC GAGCCGATGC GGTTCGAGGC GCAACCCGCC
AAGCGGCTCG ACCCGCCGCA GAGGCCGACA GGGGTCACGC TGTTCGACAA GACCGGCTCC
ACCAACGGCT TTGGCGCCTA TGTCGCCTTC GTGCCGGCCA AACGCATCGG CCTCGTCATG
CTGGCCAACC GCGCGTTTCC GATGCCAGCG CGCATCGCGG CGGCGCACGC GGTGCTGGAG
GTGTTGGCGG CCGAGGAGCC CTGA
|
|---|
| Protein sequence | MRKRVLAAIV LSGLPHVTAP ALAADPSARV AAAVEQAYRP LMKAYDVPGI AVAVTRAGHS
AVFAFGLADR ERQRPVTRDT LFEIGSVSKT FTATLVSYAQ GLGRLSLDDA PSRFLPSLRG
SALDRISLLD LGTYSAGGLP LQFPDAVTDE AAMIAYFRRW QPSAPPGTQR LYSNPSLGLF
GAAAAAAMGG DFVEMMETRL FPGLGLKHSF IRVPASESER YAWGYGKDGA PIRVNPGVLD
GEAYGVKSSA ADMIRFVEAH LDPTRLDPPI RQAVQGTQIG YFRVGAMVQG LGWEQFPYPI
SLGRLQAGNA EPMRFEAQPA KRLDPPQRPT GVTLFDKTGS TNGFGAYVAF VPAKRIGLVM
LANRAFPMPA RIAAAHAVLE VLAAEEP
|
|---|
| |