Gene Mchl_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1542 
Symbol 
ID7115152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1597767 
End bp1599263 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content70% 
IMG OID643524301 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002420335 
Protein GI218529519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0141383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCAC CCTATCGCGC CGACACAGCG CCGCGCCTCA GCTCGGCCGA GATCCGTTCC 
ATCATCATCG GCCTCGTCGC CGCGATGCTG CTCGCGGCCC TCGACCAGAC CATCGTGGCG
ACCGCCATGC CGACGATCGG GCTCGAACTC GGAGACGCCG CGAACCTGCC CTGGATCGTC
ACGGCCTATC TCCTAGCCTC CACCGCCGTC ACGCCGCTCT ACGGCAAGCT CTCCGACATC
CACGGCCGGC GGATCATGCT GCTGATCGCG ATCACCACGT TCAGCGTCGG CTCTCTGCTC
TGCGCGCTCG CCCCGACGAT GATCGCGCTG GCGCTCGCCC GCGGCCTTCA GGGCATCGGC
GGCGGTGGCC TGATCGCGCT GTCCCAGATC ATCCTCGCCG ACATCCTCTC GGCCAAGGAG
CGGGCGCGCT ATCAGGTCTA CATCGCGGGC GTGTTCGCCC TGTCCTCGGT GGCCGGCCCC
CTGCTCGGCG GCTTCTTCGC CCAGCACCTG CATTGGTCGG CGATCTTCTG GATCAACCTG
CCGATCGGGC TCGCCGCCTT CATCCTCACC AACGACAAGC TCAGGCTCCT GCCCCGCAAC
GAGCGGCGGC ACAGCGTCGA TTATCCGGGC GCGGCGCTCC TCGTCGTGAG CTCGACCAGC
CTGATGCTGG CCCTGAGCTG GGGCGGCGTT CGCTATCCCT GGGGCTCGGC GCCGGTGCTC
GGGCTCGCTG GCTTCGGTCT TCTCAGCGGC GCGGCCTTCG CGGCCCGCCT CGCGACCGCG
GGTGAACCGC TGATCCCCTT GAGCGTGCTG CGCGACCGCG TCGTCACCAG CGCGACGCTC
GCCGCCTGCT TCGCCATGGG CACCCTGATC GGCCTCAGCA TCTACGTCCC GATCTTCCTC
GAGGGCGTCA TCGGGCTCGA TCCCAGCCGC TCGGGCCTCG CGATGGTGCC GCTGATGGTC
GGGACCGTCG TGGGTGCCAC CCTCTCAGGC CGCTCAATGG CCTACCTCCG GCACTACAAG
CGCCTGCCCC TGGCGTTGCT GACGCTGAGC GTCGGCGCTT GCGGGCTGCT CGCCTTCATG
GGGCCCGGGC TTCCGCTCTG GTTCACCGAG ATCCTGTTCG TGCTGCTCTC GATGGGGATC
GGCACGGTGC TGCCGCTCTC GACGATCGTG GTCCAGAACG CGGTCGCGCC GCAGCAGCTC
GGCATCGCCA CCGCCTCGAT GAACTTCTTC CGCTCGCTCG GCGGCGCCCT GATCGTCGCG
ATCTTCGGCA CCCTCGTGCT TGGCGGGGCG GGCGGGGCCG GGGAAAGCGC GGTGCACGAC
ATGGCCGCGC TGATCCGGGG AGCCGATGCC GGCCAGCTCG GGCAGACCTT CCGCCTCGTC
TTCCTCGCCG CCTGCTTCGG CCTCGTTCTG GCGCTCGGCT GCCTCAGCCT GGTCGAGGAG
CGCCCACTGC AGGAGACCGT CGGCCCTGGG CGCGACGGGC GCGGTCAGAG GGACTGA
 
Protein sequence
MNAPYRADTA PRLSSAEIRS IIIGLVAAML LAALDQTIVA TAMPTIGLEL GDAANLPWIV 
TAYLLASTAV TPLYGKLSDI HGRRIMLLIA ITTFSVGSLL CALAPTMIAL ALARGLQGIG
GGGLIALSQI ILADILSAKE RARYQVYIAG VFALSSVAGP LLGGFFAQHL HWSAIFWINL
PIGLAAFILT NDKLRLLPRN ERRHSVDYPG AALLVVSSTS LMLALSWGGV RYPWGSAPVL
GLAGFGLLSG AAFAARLATA GEPLIPLSVL RDRVVTSATL AACFAMGTLI GLSIYVPIFL
EGVIGLDPSR SGLAMVPLMV GTVVGATLSG RSMAYLRHYK RLPLALLTLS VGACGLLAFM
GPGLPLWFTE ILFVLLSMGI GTVLPLSTIV VQNAVAPQQL GIATASMNFF RSLGGALIVA
IFGTLVLGGA GGAGESAVHD MAALIRGADA GQLGQTFRLV FLAACFGLVL ALGCLSLVEE
RPLQETVGPG RDGRGQRD