Gene Mchl_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1472 
Symbol 
ID7116690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1528802 
End bp1530916 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content68% 
IMG OID643524240 
ProductTonB-dependent receptor plug 
Protein accessionYP_002420275 
Protein GI218529459 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.686986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC TTCTGACGCG CCTGCTCGCA TCGGCCAGCG CACTCGGCGT GAGTACGCTT 
CCGAGCCATG CGCTCGATCC GACCGCGGTC GAGCTGGAGG AACTACAGGT CACTGCGCAG
GGCGGTTCCG CAAACCCCGT TGCGGCGGTT GCGGGGCCGG CCGCGAACCT GAAGACCCAG
ATCTCATCGT CGGTCGTGGC TCTGCCGGGC AACAGCACGG TGATCGATGC CGCGGAGATC
GCTCGCCTGC CGGTGCAAAG CTACGGCGAC CTCTTCCGCC CCGTGGCAGG CTTCGATGTC
TCGAATTACG GCCAGGGCGG CGTCGGATTC GGCATCGCCC TGCGCGGCTT CAGCGATGCC
GAGCACGGCC GCGACGTCGC GGTCTTCATC GACGGGGTGC CGATCAACGA GGTCTCCTCG
ATCCACACCC CGAACTACGT CGATCTCAAT CCGCTGATCC CGGAGACCAT CCGCTCCATC
AGCATCGTGC GCGGCCCCTT CTCGGTCGAA GCGGGCGACG CCAATCTCGG CGGCTCGATC
TTCATCGAGA CCAAGCGGGC CGAGCCCTTC TCGACCGTCG GCGCATCGGG CGGCTCGTTC
GGTACGGGAC GGGGGCTTGC CACCTTCAGC CAGATCGGCC CGGGGATCCA GCCCTTCCTC
GCCTACGAGG GCTACGGCAC CGGGGGCTAT CGCGAGAACG GCGATCTCGG GCGCTACAAC
GCCTTCAACA AGGTCACCAT CCCCCTCGAT CTCGGCTCCA GCCTGTCGCT GCGGGTGCAG
ATGTACGGCA CGGGGTTCGG GCAGCCGGGC TACCTGGAGC GCGACCGCGT GCGCGCGGGT
CTCGTCTCAC CGCGGGCCGC GACCAACATC ACCGATGGCG GCGGCAAGAC CCTGCAGACC
TTCGTGGCCA ACTACGTCAA CGGTGGGCCG GACGACGAGT TGTCGGCGCT TCTCTACGCC
AGCCACGACG TGTTCAGCCG CTTCTCGGAT TTCGGCGCCG GCCAGCGCGG GCAGGTCGAG
GAGCGGGAGA CCGTGGGCGG CCGCATTCGC AAGGTCTGGA CGACGAGCCT GTTCGACGGG
CTGCCGACCC AATTCCTCGT CGGCGGCGAT TGGCGGAGCG ACGCGCTCGA CGTGAACACC
GGCCCCTCGG TCGCGCGCAC GTTCACCGCA CGCACCCTCG ATCTCGATCT CTCGCAGCAC
AACCTCGCGG CCTACGCGCA GGTGCAGGTC AAGCCGGCGC CCTGGCTGAA GCTGACCGGC
GGCGCCCGCT TCGACCAGTT CTTCTACGAC GTGCGCAACA ATCTCGACCC GGCCCTGTCG
CCCAAGGTCA GCCCCAACGT GGTCTCCCCC AAGGGCGGGG CGGCGCTCAC GCCCTTCGAC
TGGCTGGAGC TGTTCGCCAA TCACGGCCAG GGCTTCCGCA GCCCTTCCGC TTCGAGCGAA
TTGACGAACA ATCCCCGCCT CACTCCGCTG ACCATCGAGA GTACGGAGGG CGGCGGCCGC
CTCGTATTCG ACCGGTTCAG TCTCCTCGGC ACGGTGTTCT TCACCGACAT CGCCAACGAG
GTCTTCCAGC CCGCACCCGG CCTGCCCGTG CAGAACCTGG GCAAGTCCCG CCGCGACGGC
TTCGAAGTCG AGGCGAAGGT GCTGGCCTAT CGTGAAGGCC TCGACCGCGT GGCGTTGTTC
GCCAACTATT CGGGCGTCTC GGCCCGACTG CTCAACGGCG CGCCATCCAT CTTCATCCCC
AACGTGCCGG CGTATCTTGC CACCGTCGGC GCCGAATTCG ACGTCGCCGC GCCGGCCGCC
CTGTTGCCCG GCGGGCGCCT GACCGGTGCG GCCTACCTGT CCTACATCGG TGCCAAGCCG
TTGACCGAGG ACGGCGTATT GCATTCCTCG CCCTATCCGC GCGTCAGCGG CCGGATCGCC
TACGTCCACC AGAGCGGCTG GACGACCTAC GGGCAGGCCA CTTGGTATCC CGGCGACCGC
ACGAGCGAGA GCATCTTCAA CTTCGGCTCG TCGGTCTCTG CCTCGGCCGC CGAGATCGTC
ACCAGCCCGC AGCCGCGCCT GACGCTGCTG GCCGGCATCA CCTCCAGCTT TGCAACAGGA
GCACCTCTTC GATGA
 
Protein sequence
MSPLLTRLLA SASALGVSTL PSHALDPTAV ELEELQVTAQ GGSANPVAAV AGPAANLKTQ 
ISSSVVALPG NSTVIDAAEI ARLPVQSYGD LFRPVAGFDV SNYGQGGVGF GIALRGFSDA
EHGRDVAVFI DGVPINEVSS IHTPNYVDLN PLIPETIRSI SIVRGPFSVE AGDANLGGSI
FIETKRAEPF STVGASGGSF GTGRGLATFS QIGPGIQPFL AYEGYGTGGY RENGDLGRYN
AFNKVTIPLD LGSSLSLRVQ MYGTGFGQPG YLERDRVRAG LVSPRAATNI TDGGGKTLQT
FVANYVNGGP DDELSALLYA SHDVFSRFSD FGAGQRGQVE ERETVGGRIR KVWTTSLFDG
LPTQFLVGGD WRSDALDVNT GPSVARTFTA RTLDLDLSQH NLAAYAQVQV KPAPWLKLTG
GARFDQFFYD VRNNLDPALS PKVSPNVVSP KGGAALTPFD WLELFANHGQ GFRSPSASSE
LTNNPRLTPL TIESTEGGGR LVFDRFSLLG TVFFTDIANE VFQPAPGLPV QNLGKSRRDG
FEVEAKVLAY REGLDRVALF ANYSGVSARL LNGAPSIFIP NVPAYLATVG AEFDVAAPAA
LLPGGRLTGA AYLSYIGAKP LTEDGVLHSS PYPRVSGRIA YVHQSGWTTY GQATWYPGDR
TSESIFNFGS SVSASAAEIV TSPQPRLTLL AGITSSFATG APLR