Gene Mchl_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1299 
Symbol 
ID7115562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1328463 
End bp1329587 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content69% 
IMG OID643524077 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002420112 
Protein GI218529296 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCC TTCTCCCTCG GTTGTGTGCC CTGCTCCTCG TCGCGGGGCT CGGCTTGCAG 
GCCCAGGCGC AGGCGCAGCC GGCCGCGCCC GCTGCAGTCC CGGTCGGGAC GGCCTTCGCC
CAACGCAAGG CCATCGATCA GGCGCTCGAC TTCGTCGGCC GCGTCGAGGC GGTCGGTCGT
GTCGAGGTGC GCGCGCGCGT TGTCGGCTTT CTGGATGCCG TCCAATTCAA GGAGGGAGAG
CCGATCAAGG AGGGGGCGCC GCTCTACCGG ATCGAGCCGG ACCTGTTCGA GGCCGCGGTC
AAGCAGGCCG AGGGCGCGCT CGAGCGCACC AGGGCTGCCG AACTCCTGGC AGCCATCCAG
TTGCAGCGGG CGCAAGACCT ACTCGATAAA AGCTCCGGGA CCGTCGTAGC CCGGGACCAG
GCCCGCGCCG CGCGGGACCA GGCGAAGGGC GCCGTCATGG GTGACGAGGC GAGCCTCCAG
ACGGCGCGGA TCAATCTCGG CTACACGCAG ATCTTCGCGC CCATTTCCGG CCAGATCGGC
CGCACCAGCG TCACCAAGGG CAACGTGGTT GGGCCCGACA GCGGCGCCCT CACCACGATC
GTCAGCCAGG ACCCGATCTA CGTCACCTTC CCGGTGAGCC AGCGCGAGTT CCTGCGCTAC
CAGCAGGGCG AGGCGCGCCC AGACCGGAGC AAGATCGGAG TCAGGATCCG TTTTCAGGAC
GGCTCGGAAT ACGGTCAGAT CGGACGGGTC GACTTCGTCA ACATCAGCGT CGACCGCGCG
ACCGACACGG TCGTCGTGCG CGCCACGATG CCGAACCCGG CCGGTGCGCT TCGCGACGGG
CAACTCGTGC GCGTCAACCT TCAGGCCGGG CAGCCGGAGC AGAAGGTCGT CGTGCCGCAA
TCCGCCCTCA TCGCCGACCA GGGCGGCGTC TACGTGTTCG TCGTCGAGGA AAGCCGGGCC
AAGATACGGC GCGTCAAACC GGAGCCTGGC GGCACCGGAA CGGACGCGGT CATCGCGGAG
GGCCTCTCGG GCGGCGAGGT CGTCATCGTC GACGGGCTGC AGCGGGTGCG GCCCGGGATC
CTCGTTCAGG CGACCCCGGC CAGCGAGACG GCCAGCAGGA TCTGA
 
Protein sequence
MFRLLPRLCA LLLVAGLGLQ AQAQAQPAAP AAVPVGTAFA QRKAIDQALD FVGRVEAVGR 
VEVRARVVGF LDAVQFKEGE PIKEGAPLYR IEPDLFEAAV KQAEGALERT RAAELLAAIQ
LQRAQDLLDK SSGTVVARDQ ARAARDQAKG AVMGDEASLQ TARINLGYTQ IFAPISGQIG
RTSVTKGNVV GPDSGALTTI VSQDPIYVTF PVSQREFLRY QQGEARPDRS KIGVRIRFQD
GSEYGQIGRV DFVNISVDRA TDTVVVRATM PNPAGALRDG QLVRVNLQAG QPEQKVVVPQ
SALIADQGGV YVFVVEESRA KIRRVKPEPG GTGTDAVIAE GLSGGEVVIV DGLQRVRPGI
LVQATPASET ASRI