Gene Mchl_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1267 
Symbol 
ID7115530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1288637 
End bp1290139 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID643524046 
Productsignal transduction histidine kinase 
Protein accessionYP_002420081 
Protein GI218529265 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC TGGAGGAAAC AGCGCGTTCT AACGCACTGG GCCGCTACGC AATCTTAGAC 
ACGGCTCCAG AGCCGGCCTT CGACGACCTT GTGCTCCTCG CCTCGCGGAT CTGCGAGGCG
CCTGTCGCAC TCATCAGCCT TGTTGGATCA GATCGGCAGT GGTTCAAGGC ACGCATCGGC
CTTGCCCCTT CCGAAATGCC CATCGAGCAA TCGGTCTGCC GTCATGCTTT GAAGCAGGCC
GGACTCTTCG TGATCTCGGA CCTGACGCTC GATCCGCGGA CCTCCCGCAA CCCTCTCGTC
ACGGGCGAAC CTCACATCCG GTTCTACGCC GGAGCACAAC TGGTGACCTC GGACGGTGTC
GCTTTCGGCA CGATCTGTGT CATCGACACC AAGCCGCGGC CGGAAGGCCT TACGGATAAC
CAGGCTAGCA GCCTTGAGGC ACTTGCCCGG CAGGCCATGT CACAGATGGA GCTCCGTCGC
GTGATCGCCG AGCGCGCTGA GACGGCGCTG CGCAGGAGCG AGGAACGGTT CCAGGCTTTG
GCCAACCTTG TTCCCGGCTT TCTCTGGAGC AGTGATCTCG TTGGTCGAGC AACGTGGTTC
AGCGAGCGCT GGTACGAGTA CTCCGGCCAA TCTGAACCGG AGGCTCTCGG CTATGGCTGG
CAGACGGTGA TCCACCCAGA CGAGCGCGAG TACACAATCA CGGGCTTCCG GGCCGCCATG
GATCAGGAAC GTCCGTATAA CCGTGAATAC CGCATTCGCG GGAAGGATGG CATCTACCGC
TGGTTCATGG TGCGTGCTGA GCCGATACGG GATGCCGCTG GGCAGATCGA TCGCTGCTAC
GGAGCGGTCA CGGACATCCA CGATCTGCAT GAGCTGCAGC AGCGTCAAGC GGTGCTGGTG
GATGAGCTGC AGCACCGCAC CCGCAATCTG CTCGCCGTGG TGCGCTCGAT CGCGCAGCAA
ACGATGACCC AGACTGGTCC GACCGAACAG TTTTGCGACC GATTCAACGA CCGTCTCGCG
GCGCTCTCAC GGGTGCAGGG TCTGCTCTCA CGTTCCGACA AGGAGCCGAT CACCATCCAG
GCGTTGATCC AGATCGAGCT CGACGCGTTC GGGGTTGCCG CGATGCAGGC GCGAGTGGCG
CTGAAGGGCC CGCCGGTCCG CTTGCGCAAG GTCAGCGTGC AGACACTCGC TCTCGCCCTG
CATGAATTGG CCACCAATGC GCGCAAGTAC GGCTCTCTCG CCAACGAGCA GGGGAGGCTC
TGGGTGAGTT GGGATACCTA CAGGGGAGAG GACGAAGAGC GGCGGCTATC GCTGGTTTGG
CAGGAAGAGG GTATCCGTCG GCCTCAGGAA GGCAGTCCGA TCCGGCGGGG CTACGGGCGT
GACCTGATCG AGAAGGCGCT GCCCTATGCA CTGAAGGCCC GCACCAGCTA CGAACTCAGT
GAGGCTCAGC TGCGCTGTGT CATCGATCTA CCGCTCACCG ATGGCGCGAA GAAACGGCCT
TGA
 
Protein sequence
MPDLEETARS NALGRYAILD TAPEPAFDDL VLLASRICEA PVALISLVGS DRQWFKARIG 
LAPSEMPIEQ SVCRHALKQA GLFVISDLTL DPRTSRNPLV TGEPHIRFYA GAQLVTSDGV
AFGTICVIDT KPRPEGLTDN QASSLEALAR QAMSQMELRR VIAERAETAL RRSEERFQAL
ANLVPGFLWS SDLVGRATWF SERWYEYSGQ SEPEALGYGW QTVIHPDERE YTITGFRAAM
DQERPYNREY RIRGKDGIYR WFMVRAEPIR DAAGQIDRCY GAVTDIHDLH ELQQRQAVLV
DELQHRTRNL LAVVRSIAQQ TMTQTGPTEQ FCDRFNDRLA ALSRVQGLLS RSDKEPITIQ
ALIQIELDAF GVAAMQARVA LKGPPVRLRK VSVQTLALAL HELATNARKY GSLANEQGRL
WVSWDTYRGE DEERRLSLVW QEEGIRRPQE GSPIRRGYGR DLIEKALPYA LKARTSYELS
EAQLRCVIDL PLTDGAKKRP