| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1050 |
|---|
| Symbol | |
|---|
| ID | 7118553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1065777 |
|---|
| End bp | 1066952 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643523843 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002419885 |
|---|
| Protein GI | 218529069 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACCTG ACGCAGTCGG CCGCGGCCGC CTCGCCGTCA TCTCCGCCCT CGGCGTGGTC
GAGATCCTCG CCTGGGGCTC CTCGTTCTAC CTGCCGGCAG TACTCGCCGG GCCCATTGCG
GCCGACACGG GCTGGCCGCT GGCCTGGGTG GTCGGCGGCC TGTCCATCGG GCTCCTGGTG
GCGGCCTTCG CCTCGCCGCG CGTCGGGCTC GCCATCCACC GACACGGGGG ACGGCCGGTC
TTGGCGCTGG CTGCCCTCCT GCTGGCGGCA GGACACGTCG TGCTCGGCCT GGCGCCGAAC
CTTCCGGTAT TCCTGGCAGG TTGGCTGGTC ATCGGGCTCG GCATGGGCTG CGGCCTCTAC
GACCCAGCCT TCGCGACGCT CGGCCGGCTC TACGGTGCAG AGGCACGCCC GGCCATCACC
ACGCTGACGC TGTGGGGCGG GTTCGCCAGC ACCGTCTGCT GGCCGCTGTC GGCTCTCCTT
GTCGAGCAGG TCGGCTGGCG GGGGGCGTGC CTCGCCTATG CGGGACTGCA CCTCGTCGTG
ACCCTGCCGT TGGTGCTGGG CCTGGTCCCG CCTGCGCCCG CGGCTGAACC TGGGACGGCG
GGAACGCACC GGATGGCTGA GCCGCTGACC GCGCGTGAAC GGCGGGTATT CCTGCTGATG
GCAGGCGTCC TGGTGCTGGG CGGCGCCGTG ATGACGCTTG TTTCGGTGCA CCTGATCGCG
CTTCTCCAGG CCCGCGGCGT GGCGCTCGCG GCGGCCGTGT CCTACGGCGC TTTGATCGGT
CCGGCCCAGG TCGCAGCCCG CGTCGTTGAG ATGGCCGCCA AGGGTCGGCA CCACCCACTC
TGGACGTTGA CCGTGGCCAT GATCCTCGTG GCGCTCGGCC TGGCGTTGCT GGCGGCGGGC
CTGCCTGCGG TGGGCGTCGC CCTGGTGCTC TACGGGGCCG GCAACGGGAT CTACTCCATC
GCCAGGGGGA CCGTGCCGCT CGCCCTGTTC GGGCCGGACC GCTACCCGGT TCTGGTGGGA
CGCCTCGCTC GACCAGGCCT TGTCGCACAG GCCCTGGCGC CGTCGCTCGG CGCAATGGCG
CTTACCTACG GCGGCGCCGA TGCGGCTTAC GCCTTGCTGT TCGCCATGGC AGCGGCGAAC
GTCGGCCTTG CCGTCGCGCT CTGGAGCGTC CGTTAG
|
|---|
| Protein sequence | MRPDAVGRGR LAVISALGVV EILAWGSSFY LPAVLAGPIA ADTGWPLAWV VGGLSIGLLV
AAFASPRVGL AIHRHGGRPV LALAALLLAA GHVVLGLAPN LPVFLAGWLV IGLGMGCGLY
DPAFATLGRL YGAEARPAIT TLTLWGGFAS TVCWPLSALL VEQVGWRGAC LAYAGLHLVV
TLPLVLGLVP PAPAAEPGTA GTHRMAEPLT ARERRVFLLM AGVLVLGGAV MTLVSVHLIA
LLQARGVALA AAVSYGALIG PAQVAARVVE MAAKGRHHPL WTLTVAMILV ALGLALLAAG
LPAVGVALVL YGAGNGIYSI ARGTVPLALF GPDRYPVLVG RLARPGLVAQ ALAPSLGAMA
LTYGGADAAY ALLFAMAAAN VGLAVALWSV R
|
|---|
| |