Gene Mchl_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1014 
Symbol 
ID7118517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1035834 
End bp1036586 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID643523811 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002419853 
Protein GI218529037 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGG AGGCCACGAC GCAGGCGATG TGCCCGCCGA GGCAGGCGGG CACATCCGTC 
CTCCGTTGTT CCCGGTCGCT CATCTTCCTG GGTGGGGCGC TGCTCGTGCC CTGCCCGGCC
TTCGCCGTAG GGAATGTGTC CACGGGTACG CCGGCCCCTG CGGCGGCGCC CGCCGATGAT
CGAGGCACCC CGGCGTCGGG TCGGGCCGAC TACCGGCGGA TGCTGGCGCG AGAGGCCGCT
TCGCAGGGTT TGCCGCCGGC TGTTGCCGAT GCCGTCGCGT ACGTGGAGAG CGGGTACGAC
GCCGGCGCGA TCGGCGGGGT CGGCGAACTC GGACTGATGC AGGTCCGGCG GGCAACCGCG
GCCATGCTGG GACACACAGG TCCCGCCGGA GCCCTCCTCG ATCCCGCGAC CAACATCCGC
TTCGGCGTCG CGTACCTCGC GCAAGCTTGG AAGCTCGCGC AGGGCGACCT CTGCCGCGCG
CTGATGAAGT ACAGGGCCGG TCATGGCGAG GAGCGGATGA GCCCACGCTC CGTCACCTAC
TGCCAGCGGG TCCGCGTCCG CCTTGCTGCG AACGATGCAT CCGTTGCAGG GACCGGTCTA
CCGTCCTCCG CCGGCAGCGT TCGTGGGGTT CCCGCGGCGC GCTCCGTGGA ACGGGATCCC
CGTACGGCAA TCGTACGGCG CTTGTGGGCT GAGCACGCCG CGCGGGTCCG CAGCATCGGG
GCCCGCATCG ACCGGATCAT GGGCGGCGGC TGA
 
Protein sequence
MRLEATTQAM CPPRQAGTSV LRCSRSLIFL GGALLVPCPA FAVGNVSTGT PAPAAAPADD 
RGTPASGRAD YRRMLAREAA SQGLPPAVAD AVAYVESGYD AGAIGGVGEL GLMQVRRATA
AMLGHTGPAG ALLDPATNIR FGVAYLAQAW KLAQGDLCRA LMKYRAGHGE ERMSPRSVTY
CQRVRVRLAA NDASVAGTGL PSSAGSVRGV PAARSVERDP RTAIVRRLWA EHAARVRSIG
ARIDRIMGGG