Gene Mchl_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0197 
Symbol 
ID7117680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp196367 
End bp197479 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID643523003 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002419070 
Protein GI218528254 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.826654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGGCTCTGAT CACCGGTGGA GCGGGCTTTA TAGGCCGGCA TCTCGCGAGT 
GCGTTGCTGG CGCGGGGTTA CCGAGTCCGC GTACTCGATA GCCTGATCGA GCAGGTGCAT
GGTGGCACCG GCCGGCCCCT CTCTCTTGAT CCGGCCGTGG AGTTCGTCGA GGGCGATGTC
CGTGACGCCG AGGCGGTGGC GCGGGCGATC GCGGGTGCGA CCCACGTCGT TCACTTGGCG
GCGGAGGTCG GCGTCGGGCA GAGTATGTAC GCGGTCGAGC GCTACGTCTC GGTCAATGAC
TGCGGGACCG CGACCCTGTT TCAGGCGCTG ATCGAGGCGC CGGTCCAGCG GGTCGTCGTC
GCCTCCTCCA TGAGCATCTA CGGCGAGGGC CTGTACCGGA CGGAAGCCGA TGCCACCGTG
GAGGACGCCG TGCGCCCGCC GCGCCGCCCC GGCGAACCGT GGGATCCGCC CGATCAGCAG
GGCCGCCCGA TGCGCCCCGT GCCGACCCCG GAATCGAAGC GCCCGGCGCT CGCCTCGGTC
TATGCGCTGA CGAAGTACAT GCAGGAACGT CTGACGCTCA CGCTCGCCCC CGCCTACGGC
ATGGAGGGCG TGGCACTACG CCTTTGGAAC GTCTACGGGC CTGGCCAGGC GCTCTCGAAC
CCGTATACCG GCGTGCTGGC GATCTTCGCG GCGCGCCTCC TCCACGGACA GCCGCCGATG
ATCTTCGAGG ACGGCGAGCA GCGGCGCGAT TTCGTACATG TCGAGGATGT GGCTCAGGCC
TTCGTGCTGG CGCTGGAGCA CCCGACCGCC GCCGGGCAGG TCTACAATGT CGGCTCCGGC
GAGGACCGCA CCGTCAACGA GGTGGCGCGT CTGCTCGCCC GCGCCATGGG TCGCGAGGAG
ATCGCTCCGC AGGTTACAGG GCAGGCGCGG GCCGGCGACA TCCGGCACTG TATCGCCGAC
ATCGGCAAGA TCACCCGCGA ACTCGGCTAC GCGCCAAAGC GCGACTTCGC CGAAGGATTG
GCCGAACTCG CGGCATGGGT TGCCGAGCAG CAGGCGGTCG ACCGCGTGGC CGAGGCAAGG
CGCGAACTCG AAGCCCGAGG TCTCGTCGCG TGA
 
Protein sequence
MKKLALITGG AGFIGRHLAS ALLARGYRVR VLDSLIEQVH GGTGRPLSLD PAVEFVEGDV 
RDAEAVARAI AGATHVVHLA AEVGVGQSMY AVERYVSVND CGTATLFQAL IEAPVQRVVV
ASSMSIYGEG LYRTEADATV EDAVRPPRRP GEPWDPPDQQ GRPMRPVPTP ESKRPALASV
YALTKYMQER LTLTLAPAYG MEGVALRLWN VYGPGQALSN PYTGVLAIFA ARLLHGQPPM
IFEDGEQRRD FVHVEDVAQA FVLALEHPTA AGQVYNVGSG EDRTVNEVAR LLARAMGREE
IAPQVTGQAR AGDIRHCIAD IGKITRELGY APKRDFAEGL AELAAWVAEQ QAVDRVAEAR
RELEARGLVA