| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0005 |
|---|
| Symbol | |
|---|
| ID | 7114064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 5593 |
|---|
| End bp | 6204 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643522832 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002418903 |
|---|
| Protein GI | 218528087 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.325089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTAT CGAGCCTCGC GCTCTTTGCT GCCGTCTACG CGGTTGCGGT TGCCTCACCG
GGGCCGGGTG TCTTCGCCCT CGTCGCCCGC GTGCTGGCGC GTGGAGCCCG CGGCGTTCCC
GCCTTCATCG CGGGTTTCCT CGTCGGCGAC TTGCTTTGGT TCTCGATCGC AGCGACCGGC
TTCGCCCTGC TCGCTCAGAG CTTTGCCGCC CTCTTCATCG GCATCCGCTA CCTCGGCGCA
GCCTGTCTCG CCTACCTCGC GTGGCGTGCA TGGACTGCAC CGGTCGAGCC CATCTCGGGT
GAGCCCGTGC ACGGCGAGAG CGGGGCGCGG CTCTTCCTCG GTGGCTTGGC CTTGACGCTC
GGCAACCCGA AGGTCGTCTT GTTCTTCCTC GCGCTGCTGC CGACCGTGAT CGATCTGGAG
CATCTGACGC CGCTCGGAAT GATCGAGATC GCCGCGACCA TCGTGGCCGT TCTCAGCGCG
ACGCTCACCG CCTACGCGGT TGCCGCAGTT CGGGTTCGAC GTCTCTTCGT CTCGGTCGGC
GCAAGGCGGG CGGTCAATCG CGGCGCCGGC ACGGTGATGG CGGGGGCAGC CATCGCTGTC
GCGGTGCGGT GA
|
|---|
| Protein sequence | MPLSSLALFA AVYAVAVASP GPGVFALVAR VLARGARGVP AFIAGFLVGD LLWFSIAATG
FALLAQSFAA LFIGIRYLGA ACLAYLAWRA WTAPVEPISG EPVHGESGAR LFLGGLALTL
GNPKVVLFFL ALLPTVIDLE HLTPLGMIEI AATIVAVLSA TLTAYAVAAV RVRRLFVSVG
ARRAVNRGAG TVMAGAAIAV AVR
|
|---|
| |