Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5881 |
Symbol | |
ID | 7112868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011738 |
Strand | + |
Start bp | 316378 |
End bp | 319731 |
Gene Length | 3354 bp |
Protein Length | 1117 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643484149 |
Product | DNA primase catalytic core domain protein |
Protein accession | YP_002381158 |
Protein GI | 218442838 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000211197 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAACAG CAACCCATCC GACAACACAA AAGACAAAAA ACACAAAAAG CAATTTAATT GACGTTTACA CCGAAGCTCT CGCCCGTTTC TCCCCAGAAC AGATCTACGA TCGCTACCCC CATAATTTCA AATCCGACGC AACAGGGAAA TTAAGAGGAA TACCGCCGTT TCGTGAGTCT AAGTCAGAAA CAAGTTTTAC CGTATTCCCA GATGGCGGAT TTTTTGATGC TGGAGACGGA TTTGGCGGAT ATGCACCAGA TTACATTCAT AGCCTCAAGA TAGGAAGATG GGAGAGGGCA AGGGGACGGG ACTTTGTAGC CGCCGTTCGT GAGTTATGCG CGCTGGCGAA GCCAGATCCG CAAGCGGATC GCGCGGGTAT CCCCTTCCCA GAACTGTCAT TAAGCCAATC AGAGATAGAA AAAGCCCAAA AATCCGAGAA TCGCCGAGGA ATATTGGCTT GTTTAATTAA ATTGGGACAG GATACATTAT GGAGTGAGTT TGGGACGGCT GCCCGTGATT ATCTGATCAA TGAACGAGGG CTAACCGAGC AGCAGATCAA GGATTTTCAC CTGGGTTATT ACCGTAAACG CTCAGATGTG GTGGATTATC TCAAGCATAA AGGCTATACC GCCACAGAGA TAAAAGAGGC AGGGGTAGCT TTAAAAAAAT GGGAGGGTTA TATCATTATT CCCTGGCTTG ACGAGGGGGG ACGGCCACTG ACGCTTTACG GGCGATATCA CCAAAAAACA GCCCCAGAAG GATTACCCAA AACCCTCGCT TTACCTGGGA TAGGCACAAA GCGATCGCCA TTGTATCTAG ACAGAGCGAT TGCAGCCGGA CACAAAGAGG TAATTTTTGT TGAGGGGGTA TTTGATGCCC TCCTGTTACA GGCATTAGGA GAAACCAGGG CTATAAGTGG GGTGGCCGCG TCATTCTCCA ACGAGCAGAT TGAAACCTTA AAACGTAACC GAATTGAGAA AGTTTATCAT TTAGGAGACC CAGACGGCGG GGGAATTGGT GGGACTAACT CGAATTTGAC AAGGTTACTC AAGGCATGCA TCAGCGTCTA TGTCCCCCCG ATGCTTCCCG ACTCTTTAGA TCCCGATGAA TTTGTAATAC GGCATGGGAT AGAAGCATTA AAGGAATTAA TAGAGCGATC GCATCATGGG TTGAGGTGGA AAGCGGCTCA AATTGTCAAC AAATGTGGAC TAGATACCGA TGCAGCTAAA GAGCGAGTTT TAAGGGAAGC CCTTGAGGTA GCTAATTCTG TGCCTTCTCA ATATAAACTA GAGCTAGAAA CGTTCTTTTG GGGGGAAATT CGCGCGACAA TGGGAGATAT GGATATTGAT GAGTTTCGGG AGTTGCTGGA GCGACAGATA AACAACGATG CCCAAACCTT ATCGGATTCT TCTGCTGACA TCCCCGACAG CTTCAGCCCC AACAGCGAAT ACACCCAACA AGTTTATAAC GTCCTCTATC GTGATAAACG TTGGATTTGT GTCGAAGGAA AACTCTACTA CTGGGAAACC AATCATTACG AGCATTCAAA GGACGTGGTC GAGAAAAAGA GGATTAGAGA CTTCCTTAAC ACTCTACCCA AGAAGAATAA AGATGGTGAG ATAACTTATC CATTCGCCAA GCCGAATTGT GTCAATAACG CTCTCGAATG GCTCAAAATG GGGTTTGGGA TCGACCCAGA ACTGGTTAAT CCCCCTGGAC TTAATTGTAC CAATGGGGTG CTGAAAATCC ATTGGATAGA ATCGACCCCA ACATGGGAGT TAGTTCCCCA TAACCCTGAG CAGTATTATC TTTATGAGCC GGTGCTAACT TATGACCCCG ATGCCCCTCA GACAGATTGC GATCGCTTAT TATCGGCATT AGATCCCGCT CAACTAACTA TATTCCTACG CAGCGTAGCG GCTTCATTAG ATATCCAAAC AGTGCGGAAA TACAAAGGAC GCTTGGTCAG AGCCTTGCTG ATGAAAGGTT TGGGGAGCAA CGGTAAAGAC TCTATCCGCG AAGTCGTGCG GCTGATGTAC GGCGGAATCG GCATGACAGG CTGTACATTA AGTGACTTCC GACAATACGA CGAGGGCAGG AAGTTTCCCC TCTCAAAACT CGGTAGAAGT CGGGTTAACT GGGCTAGTGA GAATGCTTCT TTTGCCAAAA TAGATTCTTT ACAATCTCTT AAGGCGGCCA TTACAGGAGA TCCTCTGTCG GTGGAGAACA AGGGAAAAGA TGAGAACGAA TATGACCCGA CTGCTGTATT GTTCTTTAAC TGTAATGACA TTCCCAGATT AACCGGGTCG ATGGAAGCGA TCGCCTCAAG ATATGCGGTG TTAACTTTCA ACAAAACCTT TACAATTGAT GCAGATCCGA GTAAAGGAGA GATAGAGGCC GATCCACGTT TTAAATATGA CCCTGACTTC CTGAAAACCC ATGTTTTGTC GGCTTTTCTC AATCGAGTGC TGTCAGAATT GGTTAATCTG ATGTCCGACG GGATAGATTA CCGGGCTTGC GATCGGGCCT GGAATGAAAT CAAAGCCGAA AATTCTCACC TATTTCAATT TACCCAGGAT GTGGGATTAA GTTACCTAGA GGGGAAAGAA ATGCCCGTCG GTGACATCTG GAAGCTCTTG GAGGGGTGGT ATCAAGACAA TGGGTATCTC AGTTATATCG AGTCTTCAAC AGGGAAGCTA AAGGCTGACT GGACTGATTC ACCGATACGG GGCGATCGCT TAGTAAAAGG GGCGAATCAA GTTACAGCCA GAATCCTTGA GTTATTTCCC AAAGCTAAAC GGGTTGTGTT GGCTAACAAT TCTAGAGTCA TCAGGGGTAT AGGAATTGTA CCGTCTGGTA ATGGTGATGA GGGGGGACAT AACCAGTCAC ATAACCAATT ACCTAACCCA GAAGTCTTAC CCAATAACCA TTCTAAGCAA CATAACCAAG GAGATACGGG AAATAATTCT TCTTCTAAAG AAATTGAATT AAATACATCA CCACCGGAGT CACAGCAGTC TTTGGATGAT GAAAACACTG ATTATGAAGG TTCAACTGGT TCGGTTAGGG AGATTCAAAT CCAGACACCG CGCATTCAAA ACGAACATAA CCAATTGAAT GAAGATGGTT GTGAAGAGGG AGAAACTGGT TATGACTCAT CCTCTATGGA GTCTAATTCA TCCCTTACTG AACCACATTT ACTCAAACCC GGCACTCGTA TCATCCATAA CGAAAGTTGG GTTGGAACAA TCCAAAGTAT TCATCCCGAT GGCAAGGTAG CCCAAGTTTA TTTAGATTTG ATGGAGAGTG TTCATCCGGT TGATATTGAT AACTTGAAAT TATTGGACGA ATAG
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Protein sequence | MITATHPTTQ KTKNTKSNLI DVYTEALARF SPEQIYDRYP HNFKSDATGK LRGIPPFRES KSETSFTVFP DGGFFDAGDG FGGYAPDYIH SLKIGRWERA RGRDFVAAVR ELCALAKPDP QADRAGIPFP ELSLSQSEIE KAQKSENRRG ILACLIKLGQ DTLWSEFGTA ARDYLINERG LTEQQIKDFH LGYYRKRSDV VDYLKHKGYT ATEIKEAGVA LKKWEGYIII PWLDEGGRPL TLYGRYHQKT APEGLPKTLA LPGIGTKRSP LYLDRAIAAG HKEVIFVEGV FDALLLQALG ETRAISGVAA SFSNEQIETL KRNRIEKVYH LGDPDGGGIG GTNSNLTRLL KACISVYVPP MLPDSLDPDE FVIRHGIEAL KELIERSHHG LRWKAAQIVN KCGLDTDAAK ERVLREALEV ANSVPSQYKL ELETFFWGEI RATMGDMDID EFRELLERQI NNDAQTLSDS SADIPDSFSP NSEYTQQVYN VLYRDKRWIC VEGKLYYWET NHYEHSKDVV EKKRIRDFLN TLPKKNKDGE ITYPFAKPNC VNNALEWLKM GFGIDPELVN PPGLNCTNGV LKIHWIESTP TWELVPHNPE QYYLYEPVLT YDPDAPQTDC DRLLSALDPA QLTIFLRSVA ASLDIQTVRK YKGRLVRALL MKGLGSNGKD SIREVVRLMY GGIGMTGCTL SDFRQYDEGR KFPLSKLGRS RVNWASENAS FAKIDSLQSL KAAITGDPLS VENKGKDENE YDPTAVLFFN CNDIPRLTGS MEAIASRYAV LTFNKTFTID ADPSKGEIEA DPRFKYDPDF LKTHVLSAFL NRVLSELVNL MSDGIDYRAC DRAWNEIKAE NSHLFQFTQD VGLSYLEGKE MPVGDIWKLL EGWYQDNGYL SYIESSTGKL KADWTDSPIR GDRLVKGANQ VTARILELFP KAKRVVLANN SRVIRGIGIV PSGNGDEGGH NQSHNQLPNP EVLPNNHSKQ HNQGDTGNNS SSKEIELNTS PPESQQSLDD ENTDYEGSTG SVREIQIQTP RIQNEHNQLN EDGCEEGETG YDSSSMESNS SLTEPHLLKP GTRIIHNESW VGTIQSIHPD GKVAQVYLDL MESVHPVDID NLKLLDE
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