| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5707 |
|---|
| Symbol | |
|---|
| ID | 7112885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011738 |
|---|
| Strand | - |
|---|
| Start bp | 89510 |
|---|
| End bp | 90469 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643483993 |
|---|
| Product | integrase domain protein SAM domain protein |
|---|
| Protein accession | YP_002381002 |
|---|
| Protein GI | 218442682 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCC GTCCCCAAAA CCTAGTCAAA AATGATTTTA AAAAAAAGGC CAACCGCCAC
CCTCAAAAGC AGACCGACTT GAGAATGGCT AGGGTAGAAG AGTTTTTGAG GGCGCGATCG
CTCTCAAGCA ATAGCCAAAA AGCTTACCGG CGGGAGTTAA AAAGATTCAT CAACTGGTCA
AATAAACCTT TAAATCAAAT TACGCCTCGA CAAATCGTTC AGTATAAAGA ATATTTACAA
GGAGAGTCAT TAGCGGCCAG TTCGATCAAT CGGGCATTAT GTGCGGTTAA AAGTTTTTTC
GCTTGGTTAG AAGAAACTTA CCAGACACAA AATCCAACTG TTAGCGTTGC CCTTAATAAA
TTACCTTCCC TACCCGCGTT TGACTTGAGC GACAAAGAAA TAGAAGCTCT ACAACTGGTT
TTACCACAAC GCCCCGAGGT GATGCGAAAA AGAGATGCGG CGATTATTGC GGTACTGCGA
CATGGATTAA GAGCTTGCGA GGTTGTCGCT TTAAATTTAG GAGATTATGA CGGGGTACGG
GTTCATGTAC GAGTGGGCAA AGACGACAGT GGTGGAACCG TCCCCCTGGA CGCAACAGCA
CGGGCTGCCA TAAATGCTTA TTTACAACAA CGGCGAGAAA AAGGAGAAAA GTTTAGTGCG
ACTGCACCAA TGTTTGCGTC CCACAGTCCG GTTCCGGGTA AACCAACGAG GTTAGGATAT
CAGGGTTTGT ACTATTTAAT TAAAGAATTA GGGTCGAATG CCGGAATTGA GAACTTAACG
CCACACCGCC TCAGACACAC CTTCGCCACC AATCTTTTGC TCAAAGGAAT GGATAGTCTC
CACGCGAGAA CCTTAACCCG TCATAAATCC GAAGTGAGTT TTAAGCGCTA TGCCAAACGG
GCGTTGAGTG CAGCAGCTGA ACGAGCGTTT TATGAAGCGA TAGGGGAAGA ACCCCCCTAA
|
|---|
| Protein sequence | MPARPQNLVK NDFKKKANRH PQKQTDLRMA RVEEFLRARS LSSNSQKAYR RELKRFINWS
NKPLNQITPR QIVQYKEYLQ GESLAASSIN RALCAVKSFF AWLEETYQTQ NPTVSVALNK
LPSLPAFDLS DKEIEALQLV LPQRPEVMRK RDAAIIAVLR HGLRACEVVA LNLGDYDGVR
VHVRVGKDDS GGTVPLDATA RAAINAYLQQ RREKGEKFSA TAPMFASHSP VPGKPTRLGY
QGLYYLIKEL GSNAGIENLT PHRLRHTFAT NLLLKGMDSL HARTLTRHKS EVSFKRYAKR
ALSAAAERAF YEAIGEEPP
|
|---|
| |