Gene PCC7424_5466 details

Gene Information

• Locus tag: PCC7424_5466
• ID: 7112681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011737
• Strand: +
• Start bp: 119281
• End bp: 119898
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 643483847
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_002380856
• Protein GI: 218442535
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.21524
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGAAA AATTATTTCG AGGTTTAAAC AGGCCAATTT CTAAGGGAAA TTGGAATTTA 
ATGGTTTTTG GCGAAGATCC TTATTTTATA AAAAGTATTG ACAAAGATTT AAAAGGAACG 
AGAAAGTTTC AAATCCTCGC CAATTTTTCC AATCTTATCG AACTTGAAAC TATGCTAGAA 
CAAGTTGAGC CAGATTTTCT CCTCATCTGG CATCGAGAGC AACTTGAAAT AGCTTCCAAT 
CTCAAGCGAA AATATCCGAC TCTATTTATC ATTCTCTGGA ATTGTTTATC AGGAGGAGAT 
GCAAGTTGTT TTTCCAATGC CCCCCTTGAA GAACAATTAG AAAAAATTGT ACCTTTAAAA 
ACATTTGGAA CTGTGATGTT TAGTATCCAA GGTGAAAAGA TGTATTACGA GCTTGTTAAA 
AAAACAACGG TTACTCCACG AGAAAAAAAA ATGTTACAGT TCCTTTCTTA TGGGTTTGAT 
TACAATGAAA TCGCTTCTCG TCTCGATCTA ACGAGCGGCA CTTTAAAAAT GTACATGAAA 
AATCTCCGTG ATAAACTAAA TGCCAGAGAT AAAACCCATT TGCTGGCGAT CGCTTTTAGA 
ACGGGATTGG TTTCGTGA 

 

Protein sequence

MDEKLFRGLN RPISKGNWNL MVFGEDPYFI KSIDKDLKGT RKFQILANFS NLIELETMLE 
QVEPDFLLIW HREQLEIASN LKRKYPTLFI ILWNCLSGGD ASCFSNAPLE EQLEKIVPLK 
TFGTVMFSIQ GEKMYYELVK KTTVTPREKK MLQFLSYGFD YNEIASRLDL TSGTLKMYMK 
NLRDKLNARD KTHLLAIAFR TGLVS