Gene PCC7424_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5392 
Symbol 
ID7112571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011737 
Strand- 
Start bp34349 
End bp34837 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID643483780 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002380789 
Protein GI218442468 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT TGACAGATAA CCGGCCTCAA GATGGAGAAT CCCTGGCTCA GTATCTACGG 
CGAGTGAGGA CGAGCCTGAA GATGAGCCAA GGGGAGATGG CCACAAAGGC AGGACTTCAT 
ATTCAAAGCC TGGGTAAAAT AGAAGCAGGT AAGACGACTC GATTAAACGG AAAAACTAAA 
GCCGGTTTGT CAAGAGCTTT GGGAATTCCT GAAGATTATT TGGATGCTCT GTGTCGTGGT 
GTTCCCGTTA CTTCGGTACA GCACCTTAAA ATTTGTCCTC AATGCTGGAG TCCAGGAAGT 
TCTGCCGAGC CGATTTGGTT AGATCCGCGT TCTAAGTATT GTTTTATCTG TGGCACTTCG 
TTAATCGATC GCTGTCCTTC CTGCCAGGAA CTTATCCCCT CTTTAAAATT TCGCTTTTGC 
GGCTACTGTG GTCAACCTTA CAAAAAAATA TCCAATTATG ACTCACATAT AAGGCTAGGA 
TCTATATAA
 
Protein sequence
MTILTDNRPQ DGESLAQYLR RVRTSLKMSQ GEMATKAGLH IQSLGKIEAG KTTRLNGKTK 
AGLSRALGIP EDYLDALCRG VPVTSVQHLK ICPQCWSPGS SAEPIWLDPR SKYCFICGTS 
LIDRCPSCQE LIPSLKFRFC GYCGQPYKKI SNYDSHIRLG SI