Gene PCC7424_5559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5559 
Symbol 
ID7112369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011730 
Strand
Start bp11937 
End bp13139 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content42% 
IMG OID643483572 
ProductparB-like partition protein 
Protein accessionYP_002380581 
Protein GI218442253 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAA GCAAACAAAA AAAACCTTTT GCGGGCAAAC TCACCACCCC CTCACCCAGT 
TGGTTAACGA CAGATGAAGT TCAGACAACA TCAGAAGAAA AATCACTGAT TAAATTATCT
GACATCCATC TGCCCTCGAC GCAGCCCAGA CATTACTTTG ACCCTCAATC TTTAAAAGGG
TTAGCTGACT CAATCTCTCA ACATGGAATC CTTCAGCCTT TATTAGTTCG ACCTCTAGAG
ACGGGGGGTT ATGAACTGGT AGCCGGAGAA CGGCGCTATC GGGCGGCTGG ATTGGTGGGG
TTAACCGAAG TGCCGGTAGT GGTGAAAGAA CTAACAGATG AAGAGAGTTG GCAACTAGCA
CTCATAGAAA ATTTACAAAG AGAAGACCTC AACCCGGTTG AAGAAACCGA AGGGATTTTA
CAACTATTAG CCTTTAAATT AGGGATAGCT ATTAGAGAAG TTTCTCCTTT ACTCCACCGA
CTGCAAAAAG AACAAAAAAA TCTGGCGACT TCAAGAGACA ATAACGTTAT TGGAAAAGAG
CTACCCTCAC CAACTTCTGA GTCTAATCTG ATTGATGAAA CGAGTGAAGC GGAGCTTCTT
CTGACAGACA ATAACGTTAT TGGAAAGACA ACAGAAGAGG AAAGCGAACC AGACAATAAC
ATTATTGGAA AGACAACAGA AGATGAAATT CCACTGTCCA ATAACGTTAT TGGAAAGGTA
GAACAAGAGG AAATTACACC GTCCAATAAC GTTATTGTCC AAGAGGAAGA AGTCAAGAAA
AGTGAGTCGA ATTCCCAGTT AGCGGTGATT GAATCGGTTT TTAACGACTT AGGATTAATG
ACTTGGGAAT CCTTCGTTAA CAATCGACTG CCCCTACTCA ACCTCCCTGA AAACATCACA
GAAGCCTTAA GAAAAGGACA AATTGCCTAC ACCAAAGCCA AAGCGATCGC CCTCGTTAAA
GATGACGACA AACGTTCTAA ACTACTAACC GAGGCAATAG AACAAGAACT TTCCCTCAGC
CAAATCAAAG AAAAAATCAT CGCCCTTCAA CCTTTACCCC AATCAACGAC AACAGAAATA
TCAGACCGGC TTAAAAATGC TTACCAAAAA GTCAAAAAAA CTCGGATTTG GGAAGATAAC
GCCAAACGGA AAAAACTTGA AAAGCTGTTA AACCAACTGG AAGCTTTAAT TAATGAAAGC
TAG
 
Protein sequence
MSPSKQKKPF AGKLTTPSPS WLTTDEVQTT SEEKSLIKLS DIHLPSTQPR HYFDPQSLKG 
LADSISQHGI LQPLLVRPLE TGGYELVAGE RRYRAAGLVG LTEVPVVVKE LTDEESWQLA
LIENLQREDL NPVEETEGIL QLLAFKLGIA IREVSPLLHR LQKEQKNLAT SRDNNVIGKE
LPSPTSESNL IDETSEAELL LTDNNVIGKT TEEESEPDNN IIGKTTEDEI PLSNNVIGKV
EQEEITPSNN VIVQEEEVKK SESNSQLAVI ESVFNDLGLM TWESFVNNRL PLLNLPENIT
EALRKGQIAY TKAKAIALVK DDDKRSKLLT EAIEQELSLS QIKEKIIALQ PLPQSTTTEI
SDRLKNAYQK VKKTRIWEDN AKRKKLEKLL NQLEALINES