Gene PCC7424_5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5346 
Symbol 
ID7111234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5932486 
End bp5933493 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID643483552 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002380561 
Protein GI218442232 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAA ATTTAAGAAA GTCTTACATA GCCTGGACTT CACTGCTGGC GATCGCTCCT 
TTTTTCTTCT GGGGAACAGC GATGGTCGCC ATGAAAGGGG TTATCCCCAA CACCACACCC
CTATTTATGG CAGGAGTTCG CCTTGTGCCG GCTGGGTTAT TGGTTTTAGG GTATGCGGCT
TTGTCTGGTC GTCCTCAACC TAAAAGTGGG TTAGGGTGGC TGTGGATTGG AATTTTTGCT
TTACTCGATG GGGCAATGTT TCAAAGCTTT TTAGCCCAAG GTTTAGTCAG AACCGGGGCC
GGATTAGGAT CAGTGATTAT TGACTCCCAA CCGTTAGCGG TTGCCCTTCT CTCTAGTTGG
CTATTTGGGG AAATTATCGG GTTATGGGGC TGGTTAGGGT TAGGATTGGG CATTATCGGG
ATTAGTTTAA TTGGATTGCC GGATCAATGG TTTATTGGTC TGTTTCAAGG GGAAACGATT
TCTTTTTCTT TTAGCTGGTT AGGATTGTTA AATAGTGGAG AATTGCTGAT GTTGCTGGCT
TCTCTGTCTA TGGCAGTGGG AACAGTAACT ATCCGTTTTG TCAGTCGTTA TGCGGATCCG
GTAGTGGCCA CAGGATGGCA TATGATCTTA GGAGGAATAC CGTTATTTGT CTTGTCCGGA
TTTTGGGAAT CTGACCAATG GAGTCATCTT AATCTCGAAG GCTGGTTAAA CTTAAGTTAT
GCGACTGTGT TTGGCAGTGC GATCGCTTAT GGAGTCTTTT TTTATTTAGC TTCAAAAAGC
AATCTAACCA GTTTAAGTGC CTTAACCTTT TTAACGCCTG TGTTTGCCTT GACCTTTGGG
AATCTGTTTT TATCTGAAAT TTTGAGTCCT TTACAATGGC TGGGAGTGAG TTTAACCTTA
GTGAGTATCT ATTTAATTAA TCAACGGGAA AAAATTGCAC AACACCTGCA AAAATTGCAA
TCTTCTAAAG ACTCCTCAAC CTTAGCGGAA TCAACCTCTA ATCAATAG
 
Protein sequence
MELNLRKSYI AWTSLLAIAP FFFWGTAMVA MKGVIPNTTP LFMAGVRLVP AGLLVLGYAA 
LSGRPQPKSG LGWLWIGIFA LLDGAMFQSF LAQGLVRTGA GLGSVIIDSQ PLAVALLSSW
LFGEIIGLWG WLGLGLGIIG ISLIGLPDQW FIGLFQGETI SFSFSWLGLL NSGELLMLLA
SLSMAVGTVT IRFVSRYADP VVATGWHMIL GGIPLFVLSG FWESDQWSHL NLEGWLNLSY
ATVFGSAIAY GVFFYLASKS NLTSLSALTF LTPVFALTFG NLFLSEILSP LQWLGVSLTL
VSIYLINQRE KIAQHLQKLQ SSKDSSTLAE STSNQ