Gene PCC7424_5301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5301 
Symbol 
ID7111189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp5878424 
End bp5879527 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content40% 
IMG OID643483508 
Product3-dehydroquinate synthase 
Protein accessionYP_002380517 
Protein GI218442188 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCCC GTATTCCCGT TAACTTACCC CAAAACTCTT ACGAAATTGC CATCGCTTCT 
GGCAGTTTAT CCCGACTCGG TGCTGAAATG AGTACCTTGA ACCTAGGCAA AAAAGTTTTA 
CTGGTTTCAA ACCCAGAAAT TTATGACTAT TATGGAGAAA TTGCGGTTAA TTCTCTCAAA 
ACAGCCGGAT TTGAAGTAGC GACTCATTTG ATTCCCGAAG GAGAAATCTA TAAAACCTTA 
GATTCTATCA CCCAAATTTA TGATACTGCG GTTGAAAATT TTCTAGAACG TTCCTCAACG 
ATGATTGCTT TAGGAGGGGG AGTAGTTGGG GATATGACAG GGTTTGCCGC CGCCACATGG 
TTGAGAGGGA TTTCTTTTGT GCAAGTTCCC ACCTCTCTTT TAGCCATGAT TGATGCTGCT 
ATAGGGGGAA AAACAGGAGT AAATCATCCA AAAGGAAAAA ACTTAATTGG CGCTTTTCAT 
CAACCTCGTT TAGTGTTAAT TGATCCTCAA GTTTTGAAAA CATTACCTCC TAGAGAATTT 
CGCGCCGGGA TGGCAGAAGT GATTAAATAT GGAGTCATTT GGGATGCGAA TTTATTTAGC 
CAATTAGAAG CGGCTAAAAA ATTAGATGAA TTTTCTGATC TCGATGAGGA TTTATTACAA 
ACTATTATTA CTCGCTCTTG TCAAGCGAAA GCGGATGTCG TCAGTAAAGA TGAAAAAGAG 
GCAGGATTAA GAGCTATTTT AAACTATGGT CATACGATTG GTCATGGGAT AGAAAGTTTA 
ACCGGCTACA GTCAAATTAT TCACGGAGAA GGGGTAGCGA TTGGAATGGT TGCAGCCGGC 
ACAATAGCGG TTAAATTGCA ATTGTGGAGT GAACAAGAGG CTAACCGTCA GGATGCTTTA 
ATTAAAAAAG CAGGTTTACC CACAGAAGTT CCGCCTAATG TGAATATAGA GGCAATTATT 
GAAGCGTTGC AAACTGATAA AAAGGTAAAA GCGGGTAAAG TTCGCTTTAT TTTACCGCAA 
CAGATAGGAA CTGTAACGAT TACCGATCAG GTTACGTCTG ATGTTATTCG GGAAGTGTTA 
GCTCAAATTC AAAGCAAAGC TTAA
 
Protein sequence
MYSRIPVNLP QNSYEIAIAS GSLSRLGAEM STLNLGKKVL LVSNPEIYDY YGEIAVNSLK 
TAGFEVATHL IPEGEIYKTL DSITQIYDTA VENFLERSST MIALGGGVVG DMTGFAAATW 
LRGISFVQVP TSLLAMIDAA IGGKTGVNHP KGKNLIGAFH QPRLVLIDPQ VLKTLPPREF 
RAGMAEVIKY GVIWDANLFS QLEAAKKLDE FSDLDEDLLQ TIITRSCQAK ADVVSKDEKE 
AGLRAILNYG HTIGHGIESL TGYSQIIHGE GVAIGMVAAG TIAVKLQLWS EQEANRQDAL 
IKKAGLPTEV PPNVNIEAII EALQTDKKVK AGKVRFILPQ QIGTVTITDQ VTSDVIREVL 
AQIQSKA