Gene PCC7424_5300 details

Gene Information

• Locus tag: PCC7424_5300
• ID: 7111188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 5877316
• End bp: 5878089
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643483507
• Product: type IV pilus biogenesis protein PilI-like protein
• Protein accession: YP_002380516
• Protein GI: 218442187

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTTAG CTAGAATTTG GGCGATCGCT GCCAATGGAT TTCGAGAAGT CATCCGAGAT 
CGGATCTTTT ACTTTATCGG TTTTTTTGCG CTGATTTTAG GGTTCGCCAT AAGATTACTT 
CCCAATATTT CTCTAGGAAC TCATGAGAAA ATTTTTCTAG ATTTGGGATT AGGAGCAATG 
GCACTTCTAG GAGCAATCGT AGCCATTTTT GTAGGAACAG GATTAATTAA TAAGGAGATA 
GACAAAAAAA CCGTTCTCGT TTTAATTCCA AAACCCTTAA GCCGCAGTGA ATTTATTATT 
GGCAAACATT TAGGATTATG TGCTGTCTTA GCCGTAATGC TAACCGTGAT GACCCTGATT 
TTTTTTACTT TACTGACTGG ATTTCAAACC AGTTATTCTA TCGGATTGGT ATTTATTTCT 
CAACTCTATT TATTATTAGA ATTAGCTTTA CTTACAGCAG TAGCGATCGC TTTTGGAGTA 
TTTACCAGTT CAATTTTAGC AACCCTGCTC AGTTTAGGGG TTTATTTAAT GGGTCATGTG 
AGTGTAGACT TGTTAAAATT AGGACAGATT AGTAAAAATG CTACCATTGA ATCCCTAACC 
AGCACTCTCT ATCTCATTTT GCCTGATTTG GAACGACTCA ATTTAAGGAA TGATGTTACC 
TACGGGATGT TACCCAGTAT TAATGAACTC ATAAGCAATG CTGCCTATGG GATCATTTAT 
ACGGCTTTAC TCTTGGCTAT TGCCATCGGC ATTTTTTCCC GTCGTCAATT TTAA 

 

Protein sequence

MNLARIWAIA ANGFREVIRD RIFYFIGFFA LILGFAIRLL PNISLGTHEK IFLDLGLGAM 
ALLGAIVAIF VGTGLINKEI DKKTVLVLIP KPLSRSEFII GKHLGLCAVL AVMLTVMTLI 
FFTLLTGFQT SYSIGLVFIS QLYLLLELAL LTAVAIAFGV FTSSILATLL SLGVYLMGHV 
SVDLLKLGQI SKNATIESLT STLYLILPDL ERLNLRNDVT YGMLPSINEL ISNAAYGIIY 
TALLLAIAIG IFSRRQF