Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_5268 |
Symbol | |
ID | 7109681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 5840451 |
End bp | 5840993 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643483475 |
Product | pentapeptide repeat protein |
Protein accession | YP_002380484 |
Protein GI | 218442155 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.155872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACTC AAGAATTATT ACATCGTTAT CAAGCCCAAG AACGCAATTT TGAGGAATTG AGTCTCCATC AAGCCAATTT AGTTGGGGCT AATCTCCAAC GAATTAATTT TACTCGTACC GACTTAAGCG GCTCTGATTT AAATGGGGCA GATTTAAGCG GATCTTGTTT AAAACAAGCC AATTTAACCG ATGCTGATTT AGAAAAAGCC AATTTAGTTG GGGCTAATTT AGTGGAAGTT AACCTCATTG GGGCTGATTT AAAGGAAGCT AACTTAGCCG GAGCAGATTT GACTAAAGCT GACTTGCGTT GTGCCAATTT AGAGGGAGCT AATCTTACGG GAGCTAACCT CACTCAAGTC AATTTAGAGG GAGCAAATTT AAAGGGTGCA AATCTTTCTG AGGCTCAAAT TATTGGCACT GATTTAAATG TAGCCGATAA CGTAGCGGAG CAATGGAATA GTGAACCGTC TTCTAGAGAA ACCCACCTTC ATGGGCGATC GCCAAACTGG GTCACTTGGT CAGGACAAAA GTTCAGTGAG TAA
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Protein sequence | MNTQELLHRY QAQERNFEEL SLHQANLVGA NLQRINFTRT DLSGSDLNGA DLSGSCLKQA NLTDADLEKA NLVGANLVEV NLIGADLKEA NLAGADLTKA DLRCANLEGA NLTGANLTQV NLEGANLKGA NLSEAQIIGT DLNVADNVAE QWNSEPSSRE THLHGRSPNW VTWSGQKFSE
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