Gene PCC7424_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5210 
Symbol 
ID7109542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5783544 
End bp5784581 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content33% 
IMG OID643483417 
Productprotein of unknown function UPF0118 
Protein accessionYP_002380426 
Protein GI218442097 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000144016 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGTTTG GTCAATGGGT TGGTTTTACT TTATTAATTT TTTCCTTATA TATTTTTTGG 
GAAATTCGAC AACTTATTTT ATTACTTTTT ACGGCTTTAA TTCTAGCTGA AGCTTTAAGT
ATTTTAGTTT TAAAATTACA AGAATTTGGG CTAAAACGAA GTCAATCTTT ATTAATATCA
GTTGGATTTT TATTTGCTTT TATTATTGGA GCATTTTGGT TAATCATTCC TCCTTTTATC
CAGCAGATTG AAGAATTAGT AAAATTAGTT CCGGCAGGGA TAGCCCAATT AATTACTACC
CTTCAAGAGA TTGGAACTCA ATTTGATCCC GAATTAATTC AGGCTTTGCC CACTTTTAAT
GAACTTATTG GGCAGTTACA ACCTCTAATT AATCAAATTG CTAATCGGGG ATTAAATATT
TTTTATACCT CATTAGGAAT GATTTTAAGT TTAGTTTTAT TATTAGCTTT AACCCTCATG
TTACTGGCTA ATCCTACCCC TTATCGTCAA GGATTTATTC GGTTTTTTCC CTCTTTTTAT
CGAGAACGAG TTGATAGGAT TTTAGTTCAA TGTGACCAAA CCTTAACGCG ATGGCTAATC
GTGATTATGG CTCACATGAT CATTATGACT CTTTTAAGTT GGATTGGTTT ATTAATTTTT
GGGATTCCCT TAGCTTTTTC TCAAGCCTTA CTCTCTGGCG CATTGACTTT TATTCCTAAT
CTCGGCCCTG TATTAGCGAT GATTCCTCCC ATTGCGATCG CTCTTTTAGA GGCTTCTTGG
AAACCTTGGG CGGTGATTAT CCTCTATACC ATTATTTATA TTACCATTCA ACAATTAGAC
AAGCGAATTT TAGCTTCACG AGTATTAAAA CAACATATTT GTTTATTACC CGGTATTACC
CTTCTAGCGC AAATCTTTTT TGCTTCTTTA TTTGGCTTTT TAGGGTTATT ATTAGCCTTA
CCTTTGTTTA TTGTCAGTCA AATTTGGATC AGGGAAGCAT TAGTCAAAGA TATTTTAGAC
CATTGGCGAA TTAGCTAA
 
Protein sequence
MKFGQWVGFT LLIFSLYIFW EIRQLILLLF TALILAEALS ILVLKLQEFG LKRSQSLLIS 
VGFLFAFIIG AFWLIIPPFI QQIEELVKLV PAGIAQLITT LQEIGTQFDP ELIQALPTFN
ELIGQLQPLI NQIANRGLNI FYTSLGMILS LVLLLALTLM LLANPTPYRQ GFIRFFPSFY
RERVDRILVQ CDQTLTRWLI VIMAHMIIMT LLSWIGLLIF GIPLAFSQAL LSGALTFIPN
LGPVLAMIPP IAIALLEASW KPWAVIILYT IIYITIQQLD KRILASRVLK QHICLLPGIT
LLAQIFFASL FGFLGLLLAL PLFIVSQIWI REALVKDILD HWRIS