| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5044 |
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| Symbol | lpxB |
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| ID | 7107190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5605413 |
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| End bp | 5606567 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643483254 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002380264 |
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| Protein GI | 218441935 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.309245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATTT TTATTAGTAC GGGTGAGGTC TCAGGAGATT TACAAGGGGC GATGTTAATT
GAAGCCCTTA AACGTCAAGC AGCACTCAAA GCTATGGATT TAGAAATTGT AGCTTTAGGA
GGCGATCGCA TGGCAGAAAC GGGGGTAAGT CTATTAGGAA AAACGCCTAA AATTGCCTCT
ATAGGACTGA TTGAAGCTTT ACCCTTTATC ATGCCTACTT GGAAACTTCA GCGCAAAGCT
AAACAGTATT TACAGGAAAA TCCGCCCGAT TTATTAATTT TAATTGACTA CTGTGGCCCT
AATGTGGCTA TCGGTAAATA TGCCCGAAAA AATATCCCCC AAGTCCCTAT TCTTTATTAC
ATCGCCCCTC AAGCTTGGGT CTGGACAACG AACAAAAAAA CAACTCAGGA CTTAGTTAAT
ATTACCGATC ATTTGTTAGC TATTTTCTCC GAAGAAGCCC GCTATTTTGC TCAAAAAGGT
ATGTCCGTTA GTTGGGTAGG TCATCCTATT TTAGACCGGA TGGCACAAGC CCCGACAAGG
GAAGAAGCGC GACAAAAATT AGGCATTAAA CCCGACCAAA CCGCGATCGC ATTATTACCC
GTTTCCCGAA AACAAGAGTT AAAATATCTG TTACCGGTGG TTTGTCAAGC CGCCCAACAA
ATCCAAGAAA AACTCCCCGA TGTTCAGTTT TTAATTCCTT TAGCCTTAGA AGATTATCGC
AGCACGATTT CTGCTATGAT GGAAGAATAT GGACTACAAG GGACAATTTT AGATGGAAAA
TCTTTAGATG CTCTCGCGGC TGCGGATTTA GCCATTGCCA AATCAGGAAC GGTTAATTTA
GAATTAGCTT TGTTAAATGT TCCCCAAGTC GTGGTCTATC GTCTCACTCC CTTAACCTTG
TGGATAGCCC AAAATATTCT TAAGTTTTCT GTGCCTTTTT TGTCGCCGGT TAATCTGGTG
GTGATGGAAG AAGTTGTCCC CGAATTATTT CAAGAGCGAG CTACCCCAGA ACAAATTGTT
CAAGAATCTC TCGATTTATT ATTAAACCCT CAACGTCGTC AAAAAACCCT ATCCGACTAT
CAACGAGTCC GAGAGGAATT AGGAGAGGTG GGAGTCTGCG ATCGGGCCGC TCAAGAAATT
TTAGACTATG TGTGA
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| Protein sequence | MRIFISTGEV SGDLQGAMLI EALKRQAALK AMDLEIVALG GDRMAETGVS LLGKTPKIAS
IGLIEALPFI MPTWKLQRKA KQYLQENPPD LLILIDYCGP NVAIGKYARK NIPQVPILYY
IAPQAWVWTT NKKTTQDLVN ITDHLLAIFS EEARYFAQKG MSVSWVGHPI LDRMAQAPTR
EEARQKLGIK PDQTAIALLP VSRKQELKYL LPVVCQAAQQ IQEKLPDVQF LIPLALEDYR
STISAMMEEY GLQGTILDGK SLDALAAADL AIAKSGTVNL ELALLNVPQV VVYRLTPLTL
WIAQNILKFS VPFLSPVNLV VMEEVVPELF QERATPEQIV QESLDLLLNP QRRQKTLSDY
QRVREELGEV GVCDRAAQEI LDYV
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