Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4990 |
Symbol | |
ID | 7107056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5547459 |
End bp | 5550326 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643483201 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002380211 |
Protein GI | 218441882 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGAC CCAAAGGAAA TCCAAATCTA TCCCTCTACC ACTTTACTAC CGATCGGGAT GAGTCGCTAA CCGCTAAATT ATCCCTAAGA GTGACTGATT CAATGCTTGA ACAGATTCAA ACTCAAGATA ATTGGCAAGA ATTTGTCCGA GAAGCCATTG CCGAAAAACT TCAACGGACA AAAGAAAACT TTTGCAGCGA AACCAATACT ATTGTTAACT TTTTTCCGGA TTTATTATTA ATAATAAATA ATCAAGGTAT AATAGAAAAT TATTGGGGAA GCCATCTATC TCAAGTCTAT GGACTTCCAA CAGATATCTT AAAAAAATCA ATCCAGGAAG TTATTTCAGT TTCCGTAGGA GAACAAATCA CAGAAGCCTT TGCACGGCTT CAAGTGGGAC AATCATTAGT AAATTTAGAA TATTCTTTAG TCGTTAATGA GCAAGAGGAA TTTTATGAAA TTCGACTCGT TAACCTATCA CAACCAGAGC ATTTTTTAGG CATAATTCGC AATATTAGCA ACTGTAAGCG AGTAGAATTA CAATTACGTC ACAATGAACA TTTATACAGA GCCATTGGAG AGACTATCGA TTATGGGATT TGGGTTTGTC AACCCGATGG ACGCAACATT TACGCCAGTG AATCCTTCTT AAATTTAGTA GGATTGACTC AAGAAGAATG TTCTAATTTT GGTTGGGGAA ATGTCTTACA TCCCGACGAT GCACAAGAAA CCATTAGCGC CTGGAAAGAA TGTTCTCGCA TTGGTAGTTT TTGGGATAGA GAGCATCGTT ATCGGGGAGT GGATGGACAA TGGCATCCTA TTTTAGCGCG TGGTGTTCCT GTGCGGGATG CAAACGGAGA CATTATCTGT TGGGCAGGAA TAAATCTTGA TATCAGCCGC CTGAAACAGA CAGAAGAGAA ATTACGAGAA AGTGAAGAAC GCTTTAGGAT TTTGGCTGAT AGTGCCCCTG TGTTAATTTG GATGAATGGT TTTGAGGGTG GGTGTGAGTT TGTCAACAAA GCTTATTTAG ACTTTTTTGG GAAAACCCTC TCAGAAGTAC AAGGATTAGC TTGGTCTGAT TATCTCCACC CAGATGATGC CTCTTATATT CAAGTTTACT TAAAAACCTT TAAAGAGCGT CAGCCATTTC GGGCACAAGG GAGATTTAAA CGGGCAGATG GTCAGTATCG ATGGCTAGAA TCGAGAGCTA ATCCCCGTTT TAGTTCTACA GGAGAATTTC TCGGTTATAT CGGGACTAGC TCAGATATAT CAGAAATCAA AGAGGCGGAA GAGGCTCTAC TGCAACGAGA GCAACGCTTT AGCACCTTGT TTAACGGGAT GGAAGACTGG ATTTTAGTTT ATCCTGTCAC AGAAGAGGGA CATCCCGGCA ATTTTATCGA AGTTAACGAA CAAGCCTGTA AAAAACTCGG CTACAGTAGA GAAGAATTAC TGCAAATGTC GGTTAGAGAT ATTGTCAATA CATTGTTTAT TAATGCCGAA ATCAATTTTA AAAAATTACT CTCGGCTAAA CATTTAGTTT TAGAATCGGT TCATAGGACA AAAGACGGTG AAAACATACC CGTTGAGGTG AGTGCAACTT TATTTACTTT AAATGGGTTG CCAACGGTGC AAGCCATTTG TCGAGATATT ACCGAACGCA AACAAATAGA ACAAGAGCGG GAAAACTTAT TAATTCAAGA ACAAGCCGCC AGAGAAGTCG CCGAATCTGC GAATCGGATC AAAGATGAAT TTTTAGCGGT ATTATCTCAT GAATTACGTT CCCCCCTCAA TCCGATTTTA GGATGGGCAA AGTTATTAAA TACCCATACA TTAGAGCCGG CAACCCATCA AAAAGCGCTC TCTATTATTG AACGCAATGC CCAACTACAG GCTGAATTAA TCGAAGATCT TCTGGATGTC TCCCGAATTC TTCGGGGTAA ACTGACTCTC AAAATCGTTT CCGTTAATTT AGGGTTTATT ATTGACTCAG CCATAGAAAC AATCCGATTA GCCGCACAAG CCAAAAATAT TCAGATTCAG ACCAAACTTG ACCCCAATAT AGGGGAAGTT TTAGGCGATC CGGCTCGTTT ACAGCAAATC GTCTGGAATC TTCTCTCAAA TGCCGTTAAA TTTACTCCTA CGGGGGGAAA GGTAGAGATT GAGTTAAATT CTCTGGGTAA CTGGGCTAAA ATTAGGGTCA CGGATACTGG CAAAGGCATT ACCTCAGATT TTTTACCTCA TATATTCGAT TACTTTCGTC AAGCAGATAG CACCACGACA CGAATTTTCG GAGGACTGGG GTTAGGATTA GCGATCGCCC GTCATTTGGT TGAGTTACAT GGGGGGACAA TTAAAGCCGA AAGTTTAGGA GAAGGTCAAG GAGCAACCTT TATCGTTAAA TTACCCTTAA TCCCCGAAAC GGTACAATCC CAAAAGCAAA GCTCTGTTAG TCCTTCCAAG ACTCACAAAA AGGCGGTTTT ACCCCTAACC CAGACTCATA TTTTAGTTGT AGATGATGAA GTCGACACCC AAGACTTTTT AAGGTTTGTG CTTGAAGACT CTGGTGCTAC AGTAACCACC GTCGCCTCTG CTAGTGAAGC CTTAAAATCT TTAAAGCAAT CTAACTTTAA TATTGTCATC TGTGATATTG GGATGCCAGA AACCGATGGT TATACCCTGA TCCAAGAACT ACGGACTTGG GAAAAGTTAA CCGGCAAAGA ACAAACCCCC GCGATCGCAC TAACCGCCTA TGCAGGAGAA GGCGATCGAA TTCAAGCGTT TTCGGCAGGG TTTCAACGAC ATCTAACTAA ACCCGTTGAA CCTGAAAAAT TGCTTAAAAC GGTGGTTGAT TTGATTAGTC AACGTTAA
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Protein sequence | MVRPKGNPNL SLYHFTTDRD ESLTAKLSLR VTDSMLEQIQ TQDNWQEFVR EAIAEKLQRT KENFCSETNT IVNFFPDLLL IINNQGIIEN YWGSHLSQVY GLPTDILKKS IQEVISVSVG EQITEAFARL QVGQSLVNLE YSLVVNEQEE FYEIRLVNLS QPEHFLGIIR NISNCKRVEL QLRHNEHLYR AIGETIDYGI WVCQPDGRNI YASESFLNLV GLTQEECSNF GWGNVLHPDD AQETISAWKE CSRIGSFWDR EHRYRGVDGQ WHPILARGVP VRDANGDIIC WAGINLDISR LKQTEEKLRE SEERFRILAD SAPVLIWMNG FEGGCEFVNK AYLDFFGKTL SEVQGLAWSD YLHPDDASYI QVYLKTFKER QPFRAQGRFK RADGQYRWLE SRANPRFSST GEFLGYIGTS SDISEIKEAE EALLQREQRF STLFNGMEDW ILVYPVTEEG HPGNFIEVNE QACKKLGYSR EELLQMSVRD IVNTLFINAE INFKKLLSAK HLVLESVHRT KDGENIPVEV SATLFTLNGL PTVQAICRDI TERKQIEQER ENLLIQEQAA REVAESANRI KDEFLAVLSH ELRSPLNPIL GWAKLLNTHT LEPATHQKAL SIIERNAQLQ AELIEDLLDV SRILRGKLTL KIVSVNLGFI IDSAIETIRL AAQAKNIQIQ TKLDPNIGEV LGDPARLQQI VWNLLSNAVK FTPTGGKVEI ELNSLGNWAK IRVTDTGKGI TSDFLPHIFD YFRQADSTTT RIFGGLGLGL AIARHLVELH GGTIKAESLG EGQGATFIVK LPLIPETVQS QKQSSVSPSK THKKAVLPLT QTHILVVDDE VDTQDFLRFV LEDSGATVTT VASASEALKS LKQSNFNIVI CDIGMPETDG YTLIQELRTW EKLTGKEQTP AIALTAYAGE GDRIQAFSAG FQRHLTKPVE PEKLLKTVVD LISQR
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