| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4745 |
|---|
| Symbol | trpA |
|---|
| ID | 7109356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 5264839 |
|---|
| End bp | 5265639 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643482960 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_002379973 |
|---|
| Protein GI | 218441644 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGG TTTCCCACTG TTTTAAAACT CTACGCGATC GCGGAGAATG TGCCCTCATT
CCTTTTATCA CCGCAGGAGA TCCAGATTTA GAAACCACCG CCAAAGCTTT GTCTGTTTTA
GCCCAATCAG GAGCAGATAT CATCGAATTA GGCGTTCCTT ACTCTGATCC TCTCGCAGAT
GGGCCGGTTA TTCAAGCCGC CGCTACTCGC GCCTTAAACC GAGGAGTTAA GTTAGAAGGA
GTGTTAAAAT TAGTCGAGGA TTTTACCAAA GAGTATAAAA CGCCCATTGT ACTTTTTATT
TATTATAATC CGATTTATTA TCGAGGGGTA GACTCTTTTT TGGCACAAAT CGCAGCAGCC
GGGGTTAAAG GGTTAGTTGT GCCCGATTTA CCCCTAGAAG AAGCCGACAA TTTACTGAAA
CCCGCCTCAG AGATGGGAAT AGAAGTGACT TTGTTAGTTG CTCCTACCAG TCCAATAGAG
AGGATAAAAG CGATCGCTCA ACAGTCTCAA GGGTTTACCT ATCTGGTGAG TGTGACTGGA
GTAACGGGAG TGCGATCGCA AGTAGCCAGT AGAGTTAAAG AGTTAATTGC TTCTATGCGA
ACTGTAACCG ATAAACCGAT TGGAGTGGGG TTCGGAATTT CTACCCCCGA ACAAGCTTTA
CAAGTGAAAC AATGGGGAGC AGATGCGGTT ATTGTGGGAA GTGCGATCGT AAAGCGGTTA
GCAGAAAATC CCCCCGAAGC CGGGTTAAAA TCAATAGCAG AGTTTTGTCA CAGTTTGAAA
CAAGCTATTA TCAATGGATA A
|
|---|
| Protein sequence | MTSVSHCFKT LRDRGECALI PFITAGDPDL ETTAKALSVL AQSGADIIEL GVPYSDPLAD
GPVIQAAATR ALNRGVKLEG VLKLVEDFTK EYKTPIVLFI YYNPIYYRGV DSFLAQIAAA
GVKGLVVPDL PLEEADNLLK PASEMGIEVT LLVAPTSPIE RIKAIAQQSQ GFTYLVSVTG
VTGVRSQVAS RVKELIASMR TVTDKPIGVG FGISTPEQAL QVKQWGADAV IVGSAIVKRL
AENPPEAGLK SIAEFCHSLK QAIING
|
|---|
| |