Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_4625 |
Symbol | |
ID | 7107642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 5130591 |
End bp | 5131817 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643482842 |
Product | S-layer domain protein |
Protein accession | YP_002379855 |
Protein GI | 218441526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000221047 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTACCTT TAAATCACTC TTTGACTCGT GTTGGTTTTC TCGTCTGTCT GGTCAGTTTA TTGACCGCCT GTAGTGGTAA TGGTACTCTA GAGGGTAGAT TTGCTCCCGA TCCGGCCTTA CAAGAAAATT CCCAACCCTC TGGTGATAAC CCCTCTCCCA CTGTTACTCC TTCCAATACT CTTGAAGCGG AAAATATCCC CGAAGATATT CCTATTTACC CTAACGCTCA ACTCGAATCC GCACAAGCCG GTTCAACTCC TGACTCAGGA ATAACTCGTT GGACATCTTC AGATCCGAGT AATTTAATAG AAAACTATTA TCAACAACAA TTTCAAGCCG GCAATTGGGA AATTACTCAA CCCTTTTCTA CCGAACCAGA CCAAGATAAT AATACCTTAA TAGCGAGTCG GGATGGATTA AATGTTCAAG TCAAGGTGAC TCCTTCCTCT GGCAACTCTT CTAATACAGA TTTTGTCATT GACTACGAAA AAAATAATAA CACTTCCCCT CAATCTTCAA CGAATATCCC CAACTCAACC CCAACACCTT CCCAAACAAG CACTAACTTT TCTGATCTTG ATCAAGTTCC TGAACCTTGG CGTAATAATA TTAAAGATTT AGGAACTTTA GGGGTTTTAA GTGCAGATAA AGGGGATCAA TTTAACCCTA ATGCTGCCGT TACTCGCCGA GTGTTTGCTC GTTGGTTATA TAATGCCAAT AATAAAATCT TTGCTAATTC TGCGGGTAAA CAAATTCGCC CCGGTTCAAC CAATTCTCAA AGTGCTTTTC AAGATATTAA CCCGAAAGAT CCTGATTTTG AAGCAATCCA AGGACTTGCA GAAGCGGGTA TCATACCCTC TCGGTTGACG GGGGATAGTA GCGCCTTGTT ATTTCGTCCT GATGCTCCTC TGACTAGAGA GGATTTATTA CAGTGGAAAG TTCCCCTAGA TACCCGCAAA GGGTTACCCA CTGCTTCTAT TGATAGCGTC AAGGAAACTT GGGGGTTTCA AGATACCTCA AAAATTAAAC CGAATTCCTT GCGATCGCTA TATGCTGACT TTCAAAATGC CGATCAAGCG AATGTAAGAC GGGTGTTTGG ATATACAACC CTATTTCAAC CGACAAAACC GGTGACTCGT GCTGAAGCGG CAACCGCTTT ATGGTATTTT GGCTATCAAG GGGATGGAAT GTCTGCTCAA GACGCTTTAA CAATGGATAA TGGATAA
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Protein sequence | MLPLNHSLTR VGFLVCLVSL LTACSGNGTL EGRFAPDPAL QENSQPSGDN PSPTVTPSNT LEAENIPEDI PIYPNAQLES AQAGSTPDSG ITRWTSSDPS NLIENYYQQQ FQAGNWEITQ PFSTEPDQDN NTLIASRDGL NVQVKVTPSS GNSSNTDFVI DYEKNNNTSP QSSTNIPNST PTPSQTSTNF SDLDQVPEPW RNNIKDLGTL GVLSADKGDQ FNPNAAVTRR VFARWLYNAN NKIFANSAGK QIRPGSTNSQ SAFQDINPKD PDFEAIQGLA EAGIIPSRLT GDSSALLFRP DAPLTREDLL QWKVPLDTRK GLPTASIDSV KETWGFQDTS KIKPNSLRSL YADFQNADQA NVRRVFGYTT LFQPTKPVTR AEAATALWYF GYQGDGMSAQ DALTMDNG
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