| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_4622 |
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| Symbol | |
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| ID | 7107639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5127386 |
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| End bp | 5129335 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643482839 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002379852 |
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| Protein GI | 218441523 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00204986 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAAA CCATTCCTAT TCCATCCTCT AAAACTCAAT ATGAAGTAAC CCAAAAAGAA
GCTGAGATCA AAGAAGATTT CATTAAAACT GAGGACAGAC CTACAGAAAG TGAAATAGAT
CTAGAGTTTC TTTATACCAG GGATATAGAA TTTCGCCAAG AAACCATTTA TTTTATTGTA
GTTGATCGCT TTTATGATGG TGATCCCAAT AATAGCGAAG GCCCTAACCC AGAATTATAT
GATCCGGATC AACAAGACTG GGGGAAATAT TGGGGAGGTG ATTTACAAGG GATTATCGAA
AAATTAGATT ATCTTAAAAA TATGGGAGTA ACCGCCCTTT GGTTAACTCC TTTATTTGAA
CAAGTAGAAG CTTTATTTGT AGAATCTGCT GCCATTCACG GGTATTGGAC TAAAGATTTT
AAACGGTTTA ACCCCCGCTA TATTGGAGAA GGAGAAAACC CCTCTCTTAA CGAAACTCAA
GAAAGTCGAG ATACAACGTT TGACCGTTTG ATTAAAGAAT TACACAAACG GAATATGAAA
TTAATTTTAG ATATAGTTTG TAACCACAGT AACCCAGATT TTAGCGGAAA AAAAGGGGAA
CTGTATGACG ACGGCGTTAA AATTGCTGAT TTTAATGATG ATAAAAATCA TTGGTATCAC
CACTATGGTG AGATTATGGA CTGGGAGGAT GAATGGCAAG TTTTAAACTG TGAATTATGT
GGATTAGCGA CTTTTAATGA AAATAATACC GAATATCGCA ATTATATTAA ATCTGCGATT
AAACAATGGT TAGACCGGGG AGTAGACGCG CTGCGAGTCG ATACCGTGAA GCATATGCCG
ATCTGGTTTT GGCAAGAATT TAATGCAGAT ATCCAAACTC ATCGACCGGA TGTGTTTATT
TTTGGCGAAT GGATTTATAG TAATCCTTAT GACGATCGCT CAGTAGAATT TGCCAATCAT
TCTGGGATGA GTATCCTAGA TTTTGGGTTA TGTATGGCCA TTCGTCGGGC GTTAGGCAGT
TGGGAAGAGG CAGGATTTCA TCTAATTGAA GAAATTTTTG CCCAAGATTA TCGCTATGAA
CGGGCAACAG AATTGATTAC TTTTATCGAT AATCATGATA TGCACCGTTT CCAAAGCTTA
AATCCGGATC CGGATATCCT ACGGATGGCG ACGGTTCTAA TTATGACTTG TCGGGGGATT
CCTTGTCTAT TTTACGGAAC GGAACAATAT TTACACGATG ATACTAACGC AGACAGCAAC
CCCTACGGCA ATAATGACCC CTATAACCGC CCGATGATGG ATAAATGGGA GATGGATACT
CCTATTTATC AAGATATTCG TCGTTTGTCG GGGGTAAGAC GGTTAAATCC GGCGGTGTCG
ATGGGGAGTC AATGGCAAAA ATATCTCACC GAGGATGTTT ATTGTTATAT CAGACGTTAT
CGGGATTCTA TTGTGTTTGT AGCGATGAAC CGAGGCGAAC CCGTAACCCT AGAGGCGGTA
GAAACTGAAT TACCCGACGG GGAACATACG GATATTATGT CTCTCAATAA ATATCAAGTT
GTAGAGGGTC ATCTTCATAA TTTACACCTA GACTCAAAAC AGATTATCGT CATTAGTCGG
GTAGGAGAAC GAGTTAAAGG ACAATCGATC GTTAGGGTAC AAGTTAACGG GGTAAATACT
CAACCCGGCG AAACGATTGT GGTTACCGGT GACTGTCCAG AATTAGGCAA CTGGGATATT
GCTAAAGCGT ATCCCCTCGA ATATATCAAC CAAAATACTT GGTTTGGTGA AATTCCCTTT
AATGAAAGTG CGGGTAAACC CATTGCTTAT CGATATGCCA TGTGGCGAGA AGGACAATCT
CCGGTGAGAG AAAATTTAGT CTGTCGTCGT TGGGTTGTGG CCAGTGAAGG GACGGTTAAA
TGGCGCGATC GCTGGTCTAG TGAACAGTAA
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| Protein sequence | MEKTIPIPSS KTQYEVTQKE AEIKEDFIKT EDRPTESEID LEFLYTRDIE FRQETIYFIV
VDRFYDGDPN NSEGPNPELY DPDQQDWGKY WGGDLQGIIE KLDYLKNMGV TALWLTPLFE
QVEALFVESA AIHGYWTKDF KRFNPRYIGE GENPSLNETQ ESRDTTFDRL IKELHKRNMK
LILDIVCNHS NPDFSGKKGE LYDDGVKIAD FNDDKNHWYH HYGEIMDWED EWQVLNCELC
GLATFNENNT EYRNYIKSAI KQWLDRGVDA LRVDTVKHMP IWFWQEFNAD IQTHRPDVFI
FGEWIYSNPY DDRSVEFANH SGMSILDFGL CMAIRRALGS WEEAGFHLIE EIFAQDYRYE
RATELITFID NHDMHRFQSL NPDPDILRMA TVLIMTCRGI PCLFYGTEQY LHDDTNADSN
PYGNNDPYNR PMMDKWEMDT PIYQDIRRLS GVRRLNPAVS MGSQWQKYLT EDVYCYIRRY
RDSIVFVAMN RGEPVTLEAV ETELPDGEHT DIMSLNKYQV VEGHLHNLHL DSKQIIVISR
VGERVKGQSI VRVQVNGVNT QPGETIVVTG DCPELGNWDI AKAYPLEYIN QNTWFGEIPF
NESAGKPIAY RYAMWREGQS PVRENLVCRR WVVASEGTVK WRDRWSSEQ
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