Gene PCC7424_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_4060 
Symbol 
ID7108978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4499170 
End bp4500297 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content31% 
IMG OID643482285 
ProductCapsular polysaccharide biosynthesis protein-like protein 
Protein accessionYP_002379302 
Protein GI218440973 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4421] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATT CCCCCTATAA ATTAATAACA AAATTTATTA AAAATACAGG AATTACTGAA 
AAAAAACCCT TTACTCGATT ATGTAAAGCC ACATCTATCC CGGTTAACAA AGATTTTGAA
GGATTTAAGC TGATCTATAA ATCGGAAAAT TTTAAGTTAC ACAAGCCTTA TTTTTATTTA
GATCCAGAAA ATCAAACTAA TGTCATTAAT TTTTTGCCCG CTCAAATCCC TTCTCATGCA
GCAGGAATTA TCACAGCCAA TAATGTTTTC GTATCTTTAC CCTATCCGGT TCACCGATGG
AAAGGCAAAG TCTTCATAGA ACCGATGAGA AATGTATCTA AATATTTAAG TGAAATTAGA
TATTTAATAG CCCTGGAAAG TATTCCTTTT TCAAGAAAGA AAAAATTATC AGAATCTATT
TTGTTAATCA TGCCATCTCA AGATAATTAT TTTCACTGGA TAGTAGAAAC TCTGCCAAGA
TTGAAAATGA TTGAAGAAGA TAATAGGCTT AATCAACTTC CTTTGATTGT TTCTAAAAAT
AGATGTCCAA AGTTTATCAA AGAATCATTA GAAACATTAG GATTGTTGCC CAAAACCTTG
TTTTTAGAAG ATGGAGTTTA TCAATTTGAA AAGTTACATT TACTTAGTTT ATTATCCCTT
CCTTCTTACC CATCTCCCCT AGGAGTAGAA TGGTTAAGAC AAAAATTAAT CAAAGAACCC
ATTACCACAA AAAAAAGACG GATTTACATT TCTCGAAAAG ATGCCAGCAA GCGACAGACG
ATTAATGAAT CAGAAGTTGA GGAATGTCTC TCAAATTTTG GCTTTGAATC CCATTGTATG
AGCCAATATT CATTTGAAGA ACAAATAAAA ATTTTTCAAG AAGCAGAAAT AATTATTGGA
ACTCATGGTG CAGCTTTAGC TAATCTCGTT TTTGCTCCGT CTGACACAAT TTTTATTGAG
TTGTTAAATA CGCAAAAAGC CAATCCATGC TATTATATGC TTGCTTCAAT TAGAAACTTA
AAATATGGGT TTTTACTTTG TGAAAATGTA AACTCTAACT TGAAGGTTAA TATTGATGAT
TTGAGAAAGC TAGTAGAAAA GACTTTAACA GCTACAACCT CTTTGTAA
 
Protein sequence
MNYSPYKLIT KFIKNTGITE KKPFTRLCKA TSIPVNKDFE GFKLIYKSEN FKLHKPYFYL 
DPENQTNVIN FLPAQIPSHA AGIITANNVF VSLPYPVHRW KGKVFIEPMR NVSKYLSEIR
YLIALESIPF SRKKKLSESI LLIMPSQDNY FHWIVETLPR LKMIEEDNRL NQLPLIVSKN
RCPKFIKESL ETLGLLPKTL FLEDGVYQFE KLHLLSLLSL PSYPSPLGVE WLRQKLIKEP
ITTKKRRIYI SRKDASKRQT INESEVEECL SNFGFESHCM SQYSFEEQIK IFQEAEIIIG
THGAALANLV FAPSDTIFIE LLNTQKANPC YYMLASIRNL KYGFLLCENV NSNLKVNIDD
LRKLVEKTLT ATTSL