Gene PCC7424_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3980 
Symbol 
ID7107225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp4414679 
End bp4415743 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content41% 
IMG OID643482204 
Productperiplasmic solute binding protein 
Protein accessionYP_002379222 
Protein GI218440893 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.749936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTA ATAATTGGAA AAGGGAAATC GGCAAAACAG TAGGAGTTAC GTTAACGGTA 
GGATTGTTAG CCAGTTGTGG AACGCCCAAT ACAACTAACT CAGAGGATTC CAATTCTAGT
GTAACATCTA CTACAGAGTC TCAAACTCCT ACGGTAGTAG CAACAACAAC GGTGCTTTGT
GATCTCACAC AGAGAATTGC TGAGGATACG ATTAAGTTAA ATTGTCTCCT TGAACCTGGA
CTTGATCCTC ATGTGTACGA ACCTCTCCCC GAAGATCGAA AAGCTATAGA AAACGCCGAG
TTAATCCTTT ATTCTGGCTA TGGTCTTGAA CCAGAATTAA TTAAATTGAT TGAATCTACT
TCTAATAAAG CGCCCAAGGT GGCAGTAGCG CAAGAGGCAG TGCCAAACCC TTTGTTAGGA
GAAGATGATC ATCATAATCA TGAGGAAGAT CACAGTGATC ATAGTCATGA ACAGGAGGAA
CACCAAGAAG AGGCGCAAGG GGAGCAAGTG CCCGATCCCC ATGTGTGGCA TAATGCTCAA
AATGGGGTGA AAATGGTGGA AGTGATTGAG AAAAATTTAG AACAATTAGT CCCAGAACAA
GCACAATTGT ATCGCCAAAA TGCTCAAGCT CTCAAAACAG AATTATCTCA GATTGATGAT
TGGATTAAGT CTCAAATTGC CACCATTCCT AAAAGGAATC GCCAATTAAT TACAACTCAT
GATTCTTTGG GGTATTATGC CCAGGCTTAT AATATTCCGG TGGCTGGAGT ATTACAAGGA
TTAAGCACAG AAGAAAAGCC TACAGCTACT AGGGTTAAAG AATTAGTTGA TCAGGTAAAA
GCGAGTAATG TCCCGACAAT TTTTCCGGAA GTTGCGGTTA ATTCTAAACT GATTGAAACT
GTGGCTAAAG ATGCTCAGGT TAAAATTCCT GCTCAAGAGT TATATACTGA GGGTTTAGGA
GAACCGGGAT CTTCAGGGGA TAGTTACCCT AAAATGCTCG TCACGAATAC TCAAATCATT
GTAGAAGGGC TTGGGGGTGA ATTTATTTCT TTCCAAGCCC CATAA
 
Protein sequence
MIINNWKREI GKTVGVTLTV GLLASCGTPN TTNSEDSNSS VTSTTESQTP TVVATTTVLC 
DLTQRIAEDT IKLNCLLEPG LDPHVYEPLP EDRKAIENAE LILYSGYGLE PELIKLIEST
SNKAPKVAVA QEAVPNPLLG EDDHHNHEED HSDHSHEQEE HQEEAQGEQV PDPHVWHNAQ
NGVKMVEVIE KNLEQLVPEQ AQLYRQNAQA LKTELSQIDD WIKSQIATIP KRNRQLITTH
DSLGYYAQAY NIPVAGVLQG LSTEEKPTAT RVKELVDQVK ASNVPTIFPE VAVNSKLIET
VAKDAQVKIP AQELYTEGLG EPGSSGDSYP KMLVTNTQII VEGLGGEFIS FQAP