Gene PCC7424_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3959 
Symbol 
ID7107365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp4390993 
End bp4391679 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content42% 
IMG OID643482183 
ProductRibonuclease III 
Protein accessionYP_002379201 
Protein GI218440872 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACC TGCCCCAGTT AAAAAATCAA CAATTATGGC TATGTGCCCT TACCCATCGC 
TCTTATGTCA ATGAACACTT AGAGATTAAA GAACATAACG AACGCTTAGA ATTTCTTGGG 
GATGCGGTAC TAGCATTTGT GGCAGGGGAG TTTCTCTATC AACGCTATCC TCATTTAAGT 
GAAGCCCAAC TGAGTCGCTT AAGGGCTAGA TTAGTCGATG AAACCCAACT AGCTAAATTT 
GCGGTTCAAC TGGGGATAGG ACAACTGATG AGACTGGGAA AAGGGGCGAT TAAAGATGGA 
GGACGGGAAA ATCCGGCCTT ATTGAGTGAT ACCTTTGAAG CGATTATTGG GGCTTATTTT 
CTCGATGCGG GAATTGATGC GGTTCGAGAG TTTGTTCGTC CTCTATTTCA ATCTGTCGCG 
GATATTCTAA TGGTTGCCCA ATCGGAAATT CTCACCAGTG AAAAACTTCT CGATCCTAAA 
AATCGATTTC AGCAATGGAC TTTAGCTAAT TTTACGCAAA ATCCCGAATA TGTGATCATC 
GAAGAATCAG GGCCAGATCA CGCTAAGGAA TTTACCGCAC AAGTTAAAGT ACAGGGAATA 
GTCTATGGAA TTGGTAGAGG CCGACGCAAA CAAGAAGCAA CGAAAACCGC AGCCGAAGCA 
GCTTTAAAAA AAATAGGGTT ATTTTAA
 
Protein sequence
MLNLPQLKNQ QLWLCALTHR SYVNEHLEIK EHNERLEFLG DAVLAFVAGE FLYQRYPHLS 
EAQLSRLRAR LVDETQLAKF AVQLGIGQLM RLGKGAIKDG GRENPALLSD TFEAIIGAYF 
LDAGIDAVRE FVRPLFQSVA DILMVAQSEI LTSEKLLDPK NRFQQWTLAN FTQNPEYVII 
EESGPDHAKE FTAQVKVQGI VYGIGRGRRK QEATKTAAEA ALKKIGLF