| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3778 |
|---|
| Symbol | |
|---|
| ID | 7109982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 4204796 |
|---|
| End bp | 4205791 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643482008 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_002379027 |
|---|
| Protein GI | 218440698 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.95012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAAA CACTGTTTAC TCCTAACCCT GAAGCAGAAA AACCCACACC CATCCGGCCT
CGAAAAGGAG TTATTATCGG TGCAGGACAA GTAGGAATGG CCTGCGCTTA TTCTATGCTC
ATTCAAAACT GCTTTGATGA ACTCATATTA CAAGATGTCG CTAAAGACCG GGTTGAAGGG
GAAGTCATGG ATCTTCAGCA CGGAATGTCA TTTCTTGCGC CTACAGATCT CAAAGCCGGC
ACAGTAGCAG ACGTAGGAAG AGATGCAGAC ATCGTCATTA TAACCGCAGG AGCAGCCCAA
AAACCAGGAG AAGACCGCTT AAGTTTAGTT CAACGGAATG TCACTATTTT TAAAAGCATC
CTTAAAGATG TGGTCGAATA CTGCCCTAAC GCCATTATAC TGGTCGTCAC TAACCCCGTT
GATATCTTAA CTTACGTCAC CCTAAAAATT ACCGGATTTC CCAGTTCTAG AGTCATTGGA
AGCGGAACAG TATTAGATAC AGCGAGATTT CGTTCTTTAC TAGGGCAAAA AATGGATATA
GATGCGAGAA GTGTCCACGC TTATATTATC GGGGAACATG GAGACAGTGA AGTTCCCGTC
TGGAGTACCG CTAATGTGGC CGGATTAAAA TTCATTCCAG AGAGTTGGGA AGAGTTATCA
AAAAGTGAAC AAGATGTACT GAGCGATATT TATAATCAAG TCAAAAACGC CGCCTATGAG
ATCATAAAAT TAAAAGGCTA TACCTCTTAT GCGATCGGAT TAGCAACCAC CGACATTGTT
ACCGCCATTT TACGCTCTCA GGAGAGAGTT TTAACCGTCA GTAGTCTTTT AACCGGACAA
TATGGAATTA AAGATGTGTG TTTGAGTATT CCCACCGTTG TTAACGAGAA AGGAATCTTA
AAAACCGTCA ATCTCACCTT AAATGAAACC GAACAACAAC AATTAGAACA TTCTGCTAAA
GTATTGCGGG AGGTTTTTGA CTCTTTAAAC CTGTAA
|
|---|
| Protein sequence | MLETLFTPNP EAEKPTPIRP RKGVIIGAGQ VGMACAYSML IQNCFDELIL QDVAKDRVEG
EVMDLQHGMS FLAPTDLKAG TVADVGRDAD IVIITAGAAQ KPGEDRLSLV QRNVTIFKSI
LKDVVEYCPN AIILVVTNPV DILTYVTLKI TGFPSSRVIG SGTVLDTARF RSLLGQKMDI
DARSVHAYII GEHGDSEVPV WSTANVAGLK FIPESWEELS KSEQDVLSDI YNQVKNAAYE
IIKLKGYTSY AIGLATTDIV TAILRSQERV LTVSSLLTGQ YGIKDVCLSI PTVVNEKGIL
KTVNLTLNET EQQQLEHSAK VLREVFDSLN L
|
|---|
| |