Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3594 |
Symbol | |
ID | 7107468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 4011344 |
End bp | 4014838 |
Gene Length | 3495 bp |
Protein Length | 1164 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643481831 |
Product | WD-40 repeat protein |
Protein accession | YP_002378850 |
Protein GI | 218440521 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0139951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACAG CCACACCCCT TGACTATCAT TACCGAGTTG GTGGAAGTTT AGCCCATAAT CATCCCACGT ATGTAGAAAG ACAAGCAGAC ACAGAACTTT TGAGTGCCCT CCTTGAGGGA AAATTTTGTT ATGTGTTTAA CTGTCGCCAG ATGGGAAAAT CTAGCTTGAG GGTGCGGACG ATGCACCAAC TGCAATTAAA GGGGATGAGT TGCGCTTCCG TTGATATTAC CAGCCTGGGA AGTGATATTA CAAGAGAACA GTGGTACTGT GGGATTATTA CTCAATTATT TTTAGGATTT AATCTTGTCG GGAAACTGAA TTTAAAAGTT TGGTTACGAG AAAGAGAAGA ATTGTCCCCT GTGCAAAAAT TAGGGCAATT TATTGAAGAG GTTTTATTTG TCAAATGTCC TGGGGAAAAG ATTTTTATTT TTATTGATGA AATTGATAAA GTTCTTAGCC TCAAATTTTC CCTAGATGAT TTTTTCTCAT TTATTCGCTT TTGTTACAAT CAAAGAGCAG AAAATCAGAC TTATAATCGT ATTACTTTTG CCTTATTTGG AGTAGCCACT CCTGATGATT TAATCCGAGA AAAAACTCAA ACCTCTTTTA ACATTGGTCA ACCGATAGAA TTAACGGGTT TTACCCCCGA AGAAGTTCAG CCCCTAGAAA TGGGTTTTAT TGACCAAGCA GATAGACCTT CATCAGTTTT AAAAGAAATT TTATATTGGA GTGGAGGTCA ACCTTTCCTC ACCCAAAAAA TTTGTCAGTT GCTCATCAAT TTTTCCTCGT TTATCCCCGA AGGAGAAGAA CAAAAAACCG TAAAAAAAAT CGTTGATGAA CAGGTCATTA ATAATTGGGA ATCTCTCGAT GAACCGGTTC ATTTAAAAAC CATTCGAGAT CGTCTGTTGA GAAATGAACA ACGGGCAGGC CGACTTTTAG GACTGTATCA ATCGATTTTA AAACAAGGAT ATATTGAAGC GGATGATAGC CCTGAACAAG CGGAATTACG GCTATCTGGA TTAGTGGTTA AACGAGACGG AAGACTACAA GTTTATAACC CAATTTATCA AGCCGTATTT AATCCCGAAT GGGTCAATAA ACAATTAGAA AAACTTCGCC CTTATTCAGA AGCAATAGCC GCTTGGGAAG CCTCTAAATT TGAAGATGAA TCTCGACTTT TGCGGGGACA AGCCCTTAAA GATGCCTTAG CTTGGGCAAT GGGAAAAGGA TTAAGTAACC TTGATTATCA GTTTTTAACC GCTAGTCAAA AGTTAGATAA ACGGGAAGCA GAAATTAATT TAGAAACTCA AAAAAAAGCC AACGAAATTT TAACCACAGC CAATCGTAAA GCGAAAAAAC TTTTTCAGAT AGGAACGACT TTTTTAATTA TCTCATTGTT GACCGCAGCC GGCATTGCCA AAAATGCCTC AGATAGACAA CAAGAAGCCC AAATAGGTAG TCAACTTCAA CGGAGGGCGG ATACAGCTTG GCGACAATTT GAAATTGATG AAATAGAAGG ATTATTATCA GCAATGCAAG CGGGACAAGA CTTAAAAAAT ACCGTGAGAA ATGGACGCTT ATTAAAAGAT TATCCAGCCA CTAGCCCAGT CATCACCTTA GAGCAAATAT TAGACCAAAT TACCGAAAAA AATCGTTTTA AAGGACATGA AGATATTGTC TATAGTGCAA GTCTTAGTCC AGATGGTAAA CTGATTGCGA GTGCCTCAAA AGATGGGACA GTCAAATTAT GGAATCAAGT CGGAGAACAA CTCGCTATTT TAAGAGGTCA TGAGGGAGCA ATTTATGGAG TGAGTTTTAG TCCTGATGGG CAATATATTG CCACTGCTTC ATCGGATGAA ACGGCAAAAC TATGGTCTTC TGACGGCAAA GAAATTGCCA CTTTAAAAGG ACATCAAGGC TCAGTTTACA ATGTTACGTT TAGTCCCGAT GGGCAATATA TAGCGACAAC CTCTAGGGAT AATACCGCTA GATTATGGAA TAAAAAAGGA CAACAAATTG CCGTTTTAAA AGGACATACT CAGTCAGTTG ATGATATTAG TTTTAATGCC AAAGGAGATC GGATCGCCAC AGCCTCTAGA GATGGTACAG TTAAATTATG GGATATCAAG GGAATTTTGT TAGGAAATGT TCGCAGTGAC GACGTAGCTT TTTATAGTGT AGACTTTAGT CCGGATGGAA AAATAGCCAT TGCCGATAGT GAAGGAGTGG TTAAAGTTTG GGATGAAAAA GGTAATTTAA TGGTGACGAT TAAAGGTCAT CAAGATTTTA TTAATCGGGT TCGTTTTAGT CCTAATGGAA AATGGATTGC TACAGCTTCA TCGGATGGCG TGGCTAAATT ATGGAATTTA CAGGGAAAAG AATTTATCAC CTTTAAAGGT CATCAGGAAG CAATTTATGA TATAGCTTGG AGTTCTGATG GACAAGAATT AGTGACGGCC TCTGGAGATG GAACAGTAAA ATTATGGGAA ATTAATGATC AAAATTTAAC TCGAAATAGT GATCTACAAA GAAGGATTAC TAGCGTTAGT TTTAGTCCCA ATGGGGAATT ATTAGTCCGG TCTTCTATCA ATGGAGAAAT TGAACTATCA GATTTAGAAG GGAACTTAAA GCAGCAATTT GATTCGGGTT TAGATTGGAT TTCTGATCTC AAATTTAGTG CCGATAGTCA GAAAATAGTT GCCGTTTCTA GAGGAGGTAT GATTCGGCTT TGGGAGAGAA AAGGAAGGGT TTTAAAAGAA TGGCCAGAAA AGTATAATAA TTTTTCTAGT GTCGCTTTAA GTCAAGATGG AAAAAAATTA GCAACCGCCG ATAGAGAAGG TCAAGTTTGG ATTTGGGATC TCACTAATAA TGTGCCTAAA CTTCTCACTA AATTTTCTGC CCATAAAGAT GTAATTAATA GTATCAGTTT TAGTCCCGAT GGAGAAGAAA TAATCACGGC TTCTAGTGAT GATTCGGTTA AATTGTGGGA TAGTCAAGGA AATTTAAAAA CCCAATTTAA AGGACACAAA GAAGCGGTTT ATTGGGTGAG TTTTAGTAAC GACGGTAACT ATATCGGTAC TGCGTCTAAA GATGGAACGG CTAGATTATG GAATAGAGAA GGAGAAACTA TAAAGGTTTT ACAAGGAGAT TTATTTCCGG TTTATCGAGT TAGTTTTAGT CCTAACGGGA AATATATTGC AACCGGTTCT AGTGATGGAA CGGCTAGATT ATGGGATAAT CAAGGAAATT TAAGAGCAGA ATTTAAAGGA CATCAAGATT CTATTTATGG GATTACTTTT AGTCCAGATA GTAAAACGGT GACAACGGTT TCTCGTGATG GAATAGTCCG ACAGTGGCAA GTGCAAGCAG AGTTCGCCCG TCTGGAAAGT TTATTAAAAC AGGGATGTCA ATGGTTAGGA GATTATTTGG TCACTTATCC TCAAGAAAAA GAAAAACTAA CAGCTTGTCA AAAAAATAAT ATAGGGAATA AATGA
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Protein sequence | MTTATPLDYH YRVGGSLAHN HPTYVERQAD TELLSALLEG KFCYVFNCRQ MGKSSLRVRT MHQLQLKGMS CASVDITSLG SDITREQWYC GIITQLFLGF NLVGKLNLKV WLREREELSP VQKLGQFIEE VLFVKCPGEK IFIFIDEIDK VLSLKFSLDD FFSFIRFCYN QRAENQTYNR ITFALFGVAT PDDLIREKTQ TSFNIGQPIE LTGFTPEEVQ PLEMGFIDQA DRPSSVLKEI LYWSGGQPFL TQKICQLLIN FSSFIPEGEE QKTVKKIVDE QVINNWESLD EPVHLKTIRD RLLRNEQRAG RLLGLYQSIL KQGYIEADDS PEQAELRLSG LVVKRDGRLQ VYNPIYQAVF NPEWVNKQLE KLRPYSEAIA AWEASKFEDE SRLLRGQALK DALAWAMGKG LSNLDYQFLT ASQKLDKREA EINLETQKKA NEILTTANRK AKKLFQIGTT FLIISLLTAA GIAKNASDRQ QEAQIGSQLQ RRADTAWRQF EIDEIEGLLS AMQAGQDLKN TVRNGRLLKD YPATSPVITL EQILDQITEK NRFKGHEDIV YSASLSPDGK LIASASKDGT VKLWNQVGEQ LAILRGHEGA IYGVSFSPDG QYIATASSDE TAKLWSSDGK EIATLKGHQG SVYNVTFSPD GQYIATTSRD NTARLWNKKG QQIAVLKGHT QSVDDISFNA KGDRIATASR DGTVKLWDIK GILLGNVRSD DVAFYSVDFS PDGKIAIADS EGVVKVWDEK GNLMVTIKGH QDFINRVRFS PNGKWIATAS SDGVAKLWNL QGKEFITFKG HQEAIYDIAW SSDGQELVTA SGDGTVKLWE INDQNLTRNS DLQRRITSVS FSPNGELLVR SSINGEIELS DLEGNLKQQF DSGLDWISDL KFSADSQKIV AVSRGGMIRL WERKGRVLKE WPEKYNNFSS VALSQDGKKL ATADREGQVW IWDLTNNVPK LLTKFSAHKD VINSISFSPD GEEIITASSD DSVKLWDSQG NLKTQFKGHK EAVYWVSFSN DGNYIGTASK DGTARLWNRE GETIKVLQGD LFPVYRVSFS PNGKYIATGS SDGTARLWDN QGNLRAEFKG HQDSIYGITF SPDSKTVTTV SRDGIVRQWQ VQAEFARLES LLKQGCQWLG DYLVTYPQEK EKLTACQKNN IGNK
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