| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_3251 |
|---|
| Symbol | |
|---|
| ID | 7107728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 3640753 |
|---|
| End bp | 3641712 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643481495 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002378519 |
|---|
| Protein GI | 218440190 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA CAGCTTTAAT TTGTGGGGTA TCAGGACAAG ACGGAGCATA TCTAGCTCAA
TTACTACTCA ATAAAGGGTA TCAAATTTGG GGCACTTCTA GGGATGCTCA AATGTCCTCG
TTTAAAAATT TAGTGCGTTT AGGAATTAAA GAGCAAATTA AATTAACCTC AATGGCTCTT
AATGATTTTC GTAGTGTATT ACAAGTATTA TTAAAAGTCG AACCTGACGA AGTCTATAAC
TTAGCCGGAC AAACTTCTGT CGGACTGTCT TTTGAACAGC CGGTAGAAAC ATTAGAAAGT
ATTGCCACAG GAACATTAAA TCTTTTAGAA GCCATTCGTT TTACAGGCGC TCCTATTAAA
TTTTATAATG CCGGGTCTAG TGAATGTTTT GGAGATATTG GGGACACATC GGCCACAGAA
ACGACTCCTT TTCGTCCTAG AAGTCCTTAT GCGGTGGCTA AGTCGACGGC TTTTTGGGAG
GTAGCTAACT ATCGAGAAGC TTACGGAATT TTTGCTTGTT CTGGGATACT TTTTAATCAT
GAATCTCCCT TAAGACCGGA ACGATTTGTG ACTCAAAAAA TTATTGCTAC TGCTTGTCGT
ATTGCTCAAG GAAGTCAAGA AACGCTACAT TTAGGAAATA TAAGTGTTGA GCGAGATTGG
GGATGGGCCC CGGAATATGT AGAGGCGATG TATTTGATGT TACAGCATGA TCACCCGGAT
GATTACGTCA TTGCTACGGG AGAAAGTTCT AAATTAGAAG ATTTTGTCGC TCAAGTGTTT
ACTTGTTTAG GATTAAATTG GCAAGATCAT GTGGTAACAG ATAAAAGTTT ATTTAGACCT
ACTGATTTAG CGATTAGTCG AGGTAATCCG GCGAAAGCGA GAAATCAACT CGGATGGCAA
GCTCAATATA AAATGAGAGA TGTTGTCAAG ATGATGGTTG AGGATAAACA AAATAGCTGA
|
|---|
| Protein sequence | MTKTALICGV SGQDGAYLAQ LLLNKGYQIW GTSRDAQMSS FKNLVRLGIK EQIKLTSMAL
NDFRSVLQVL LKVEPDEVYN LAGQTSVGLS FEQPVETLES IATGTLNLLE AIRFTGAPIK
FYNAGSSECF GDIGDTSATE TTPFRPRSPY AVAKSTAFWE VANYREAYGI FACSGILFNH
ESPLRPERFV TQKIIATACR IAQGSQETLH LGNISVERDW GWAPEYVEAM YLMLQHDHPD
DYVIATGESS KLEDFVAQVF TCLGLNWQDH VVTDKSLFRP TDLAISRGNP AKARNQLGWQ
AQYKMRDVVK MMVEDKQNS
|
|---|
| |