Gene PCC7424_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3070 
Symbol 
ID7107853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp3433664 
End bp3434311 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID643481313 
Producttranscriptional regulator, TrmB 
Protein accessionYP_002378340 
Protein GI218440011 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02702] iron-sulfur cluster biosynthesis transcriptional regulator SufR 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.272047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTA CGCAGACAGT CTCTACCAAA CAAGATATCC TAAATTATTT GTTAAAGTTC 
GGTCAAGCGA CCGCGCAAAC TTTAGCGGAA ACTTTAGAAA TTAGTCCCCA AGCTATTCGT 
CGTCATTTAA AAGATTTAGA AACCGAAGGA CTCATAGAAC ATCAGTCAGT TCAAAATGGG 
ATGGGACGGC CTCAATATGT TTATGGGTTA AGTCGTCAAG GCCGAGAACG TTATCCTCAC 
CGCTATGGAG AGTTTGCGGT TTCTTTTTTA GATACTCTAG TGGAAACGGT AGGAGAAAAG 
CAAGTTGGGG AAGTTTTGCG GAAACAATGG CAAAGAAAAG CCAAAGAATA CCGCGATCGC 
ATTGGGGTAG GATCGTTAAA AGAAAGAGTG GCTAAATTAG TCCAATTACG ACAAGAAGAA 
GGGTATATGG CTGAATTGTT GCTGATGGAA AAGAACCATA CTCAGCAACA GAAATATATT 
TTAGCGGAAC ATAATTGTGC TATATCCGAA GTAGCCGAGT CTTATCCGAG TGTCTGCGGG 
CATGAATTAG AAATGTTCTC AGCCGTTCTC CCTGACTGTA TCATAGAACG GACTCACTGG 
ATTAATAACG GAGAACATCG TTGTGGTTAT TTAATTCAAC CTCGATAA
 
Protein sequence
MNTTQTVSTK QDILNYLLKF GQATAQTLAE TLEISPQAIR RHLKDLETEG LIEHQSVQNG 
MGRPQYVYGL SRQGRERYPH RYGEFAVSFL DTLVETVGEK QVGEVLRKQW QRKAKEYRDR 
IGVGSLKERV AKLVQLRQEE GYMAELLLME KNHTQQQKYI LAEHNCAISE VAESYPSVCG 
HELEMFSAVL PDCIIERTHW INNGEHRCGY LIQPR