Gene PCC7424_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3039 
Symbol 
ID7110143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3391980 
End bp3393224 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content36% 
IMG OID643481282 
ProductTetratricopeptide domain protein 
Protein accessionYP_002378309 
Protein GI218439980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.77025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTATT CTACATCGTT ACAGAAAAAA CTAGGCTTGA CAATCGCCAT CGTTACTTTT 
TTGATGCCAA CGGTTCAACA CTGGGGAAAT TTAAAAGCTT TTGCCCAAAT GCCTGAACCG
AATCCCTTAG AACTTCCCAT CAAAGATCCT TTAATTCCTG AACTTAATCG TCCTCTAAGT
CCTTTTGAAA TGCGAAGACT TCGGGAAGCT CTTGATGCCT CTAATCAACA AGCTCAAGCA
GAACTCGATC AGGGAAATGA TGATGAAGCG TTTAAAATTT GGTATCGAGA ACTCAGATTA
AGACAATATT TAACCCCGAT AGAAGAAATA CAAGCTTTGG GGAGGGTAGG AGAAATTGCT
TGGACAAAAA CCCGAACTCA AGACCTAAAA AATATCTATA CTCGTCTGTT AGTGGTGCAA
CAGCAATCGG AAAAGAAAGC ACCGTTAACC CCTGAACTTT TGGATGCTTT TGCTACTGCC
TATCAACAGT TACGAAAAAT AGATGAATCC CTCTACATTC ACGAAAAAAT TCTCGCTAAT
GCTCGGCAAA AAGGAGATTT ACCGACACAA ATTAAAACTT TAAATACTCT AGGAGAATTA
CATTTATCCC GTTTTGATTA TGGTAAAGCT GCCCCGATTT ATGAAGAGTT ATTAGATATC
GCTCAGTCTC AGCAAGACTC TTATCAAGAA GGGATTTATC TCAAAAAGTT GGCAGAAATT
TATACCGAAG CCTTACAACC TCAAAATGCG GTTAAAATTA AAGAAGACTT AGCTAATAAT
TATTTACGAA ATCAGCAAAT ACAATCTATT CCTGATATTA AAGTTTTAAT TGGACTAGAT
TATGATGCTT TAAATCAACC AGAAAAAGCG AGTCAAAATT TTCAAGAAGC CTTTTCCTTA
GCTTGGTCTT TGCAACAATA CGGAGCAGCC GGCAGAGCTT TGGCTCAATT AGGGGATCTT
TATCGCAAAT ACAAACAAGA TGATTATGCT CTACAAATCT ATCAAGAATT AATCAAAGTT
GAACAGCGAT CTTATAATTA TTATGGGTTA ATGAATGCTT ATGATAAAAT TGGCGAAATT
TACTTAACTA AAAAGAATTA TTCTGGAGCG ATCGCCGCTT TTCAACAGGG ATTAGAATTA
GCGAGAGCAA TTAATTATAA TGAAAATTAT TTCCTGGCAA AAATTGACCA AGCTAATCAA
CAAATGAGTA CTTCTGAACC AGTCCCAAAC CCTAAACAAC CCTAA
 
Protein sequence
MGYSTSLQKK LGLTIAIVTF LMPTVQHWGN LKAFAQMPEP NPLELPIKDP LIPELNRPLS 
PFEMRRLREA LDASNQQAQA ELDQGNDDEA FKIWYRELRL RQYLTPIEEI QALGRVGEIA
WTKTRTQDLK NIYTRLLVVQ QQSEKKAPLT PELLDAFATA YQQLRKIDES LYIHEKILAN
ARQKGDLPTQ IKTLNTLGEL HLSRFDYGKA APIYEELLDI AQSQQDSYQE GIYLKKLAEI
YTEALQPQNA VKIKEDLANN YLRNQQIQSI PDIKVLIGLD YDALNQPEKA SQNFQEAFSL
AWSLQQYGAA GRALAQLGDL YRKYKQDDYA LQIYQELIKV EQRSYNYYGL MNAYDKIGEI
YLTKKNYSGA IAAFQQGLEL ARAINYNENY FLAKIDQANQ QMSTSEPVPN PKQP