| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2738 |
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| Symbol | |
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| ID | 7109125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 3026881 |
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| End bp | 3033114 |
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| Gene Length | 6234 bp |
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| Protein Length | 2077 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643480989 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002378018 |
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| Protein GI | 218439689 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGTAA ACTCTATGAA AAACATTCCA GGATACATAA TCACACAAAA AGTTTGTGAT
CATTCTCCCA TATTAGTGTA TCGGGGTCAG AGAATAGAGG ATCAGGAATC TGTTATTATT
AAAACCCTTC CATCTGATTA TCCTACTCTA GAAGAAATCA CCTGGATTAA ACAAGATTAT
TTAATTGGTA AAAGCTTAAA TTTACCGGGA ATTGTTAAGC CGCATCAATT TATCCATCAT
CAAAATATTT TTGCGATTAT TTTAGAAGAT TTTGGGGGAA TTTCTCTGAG TTATTTTATC
CAAGAAAAAA CTCTATCTTT AACTCAAAAG TTAAAAATTG CCCTTGCCGT TGCAGAAATT
TTAGATCAAC TGCACAAAGT TCCTATTATT CATAAAGATT TGAATCCGGC TAATATAGTT
GTTAATTTAG AAACGCAAGA AATTAAAATA ACAGATTTTA TTATTGCTTC TCGTCTAGAA
TTTGAAAAAC AATGCCTAAG TCATCATCAT TTCCTTCAGG GAACATTAGC CTATATGTCT
CCAGAACAAA CTGGGAGAAT GAATTGTTCT CTAGACTATC GAACAGATAT ATATTCTTTA
GGAGTGACAT TGTATGAAAT GTTTACTGGA TCTTTGCCAT TTTCCACTTC TGATCCAGTA
GAATTAATTC ACTGCCATAT TGCCAAAAAA CCCGTTTATC CTTCTCTATT AAATCCTCAA
CTTCCTCAAT CCATTTCTGA TATTATCATG AAGGTCTTAG CCAAAAATCC TGATGAGAGA
TATCAAAGTG CTAAAGGACT TAAATTTGAT TTAGAAACTT GTCTATTACA GTTACAATCA
GATAAAAACA TCAAAGGTTT TACTTTAGGG GAAAGAGATC ATAAAACTCA ATTGCTCATT
TCTCAAAAGC TATATGGGAG AGAAAAAGAA GTAAATACAT TAATCAAAGC CTTTGAACGA
GTGAGTCAGG GAAGGAAAGA ATTAACCCTA ATTTCTGGAT ATTCAGGCAT TGGTAAAACT
TCAATTATTA ATGCAATCCA TCATCCTATT CTTGAAGCCA AAGGACTTTT TATATCCGGA
AAATTTGACC CCCTAAAAAC CAATATTCCC TATTCAGCCT TTAGAGAAGC TTTTCAAGGA
TTATTAGAAA ATTTATTAAC TGAAAAACAA GAAAGAATTG AAAATTGGCG AAAAAACTTA
TCAAATATTT TGATTAATAA CGGTCAAATC ATCATTAATA TTATTCCAGA AATAGAATTC
ATTATCGGTA AACAGCCTCA AGTAACTGCG CTAGACCCTT CCAACTCTTA TCATAGATTT
AACGAAGTTT TTAAAAATTT TATTAATGTT TTTTGTCAGC CTGAACATCC TTTAGTGATT
GTTTTAGATG ATTTACAGTG GATAGATGCC GAATCCTTAA AATTAATTGA AATGCTGATG
ACAGATGACC GGATTAAATA TTTATTCATA GTTGGAGCTT ATCGAGATAA TGAGGTAAAT
ATAACTCATC CTTTAAGCCG TACTCTAGAA AAAATTAAAG CCAAAAAATC CGTTATCCAT
TCAATGGTTA TTGAACCTTT ATCTTGTCCT GATGTTCTCC ATTTATTAAT AGATACTTTT
GACCAAACTC AGATCAAAGA AAATCTTTAT TATTTAGCGG AAATTATTTA TCATAAAAGC
CGAGGAAATC CGTTTTATAT TAATCAATTT ATCAAAAAAA TATATAAAAA TCAATTAATT
TACTTCGACC AAACTACCGA TCAATGGAGT TGGAATCTAG AGAAAATTCA AAATTTTAAT
TTATCCGATC AGAGTTTAAG TGAATTAATG GCAATTAGCC TTAGCACTTT GCCCTCCCAA
ACCCAAAATC TTTTAAAGTT TGCAGCTTGT ATAGGCAATA AATTACAGTT AACTGAATTA
GCAATTATCA CAGAAAAAAC CGAAATAGAA GTCGCTCATC AATTATGGCC GGCTCTTCAA
GCTGGATTAA TTATTCCTTG TTCAGAACAG TATAAAATAC CTCTAGTTTT TGACCTTACC
GAGACGGAAA ATGATTCAAT AAAAAATTTA GAAGCTGAAT ATCAGTTTTT ACACGATCAA
GTTCAACAGT CAGCCTATTC ATTAATTCCT CCTCAAGAAA AACCCCTCAC TCATGTCAAA
ATTGGACGTT TATTATTAGA AAATATTCCC TCAGAATTTA AAGAAGAAAG AATTTTTGAA
ATTGTTAATC ATTTAAACCT AGGGATAAAA CTTATTTCTA CTCAGAAAGA AAAAAATCAA
CTCGCTGAAC TTAATTTAAT CGCCGGGCGG AAAGCTAAAG ACTCGACAGC CTATAAAACA
GCAATAGAGT ATTTTAGATT AGGGCTAAAA CTTCTCGCGG TAGATAGTTG GCAAACTCAG
TATCGTCTTA CCCTAGCTTT ATATGAAGAA ACAGCAGAAA CCGCCTATCT CATCGGAGAG
TTTGAGAAGA CTCAAAAGTT AATAAAACTT GTCTTCCAAC AAGCTGAAAC TTTATTAGAT
AAAATTAAAA GCTATGAAAT TAAATTTCAA GTCTATATTG CTGAAAATCG TTTAGGAGAA
GCTATTAAAA GTTCTATTCC GGTTCTAAAA TGGTTAGGAG TAGATTTTCC TGAAACATTA
ACTGAAGACA ATATTAGGCA AACTCTACAG GAAATCCAAA CTACCTTAGC TGGAAAATCG
ATTGCAGATT TAGTTAATTT ACCCCTCATG AGTGATCCTT GTAAGTTAGC CGCGATTAAA
ATTATGGTAA GAGTAGGAAC GGCTGCTTAT CAAGGCAAAC CTGACTTTTT TCTGCTGATT
GTTTTAAAAG AAATTAATCT ATTATTAAAG TATGGAAATA CAGATGAATC AGCCTTTATT
TATGCCTGTT ATGGATTAAT TTTAATTGAA ATTACGGGGA ATATAGAACA AGGGTATCAA
TTTGGTCAGC TTGCCTTAAC TCTATTAGAA CAGAAAACTA CTAAAAAAGT AGAAGCTAGA
ACCCTTCTGA TGGTTTATAG TTATATCTTT TATCGAAAAC ATCATCTAAA AGAAACCTTA
GAAGGATTAG TAAAAGGTTA TCGAAGTGGG TTAGAAAATG GAGATTTAGA GTTTGCGAGT
TTCATAGCTC ATTTTTATTG TTTTTCCTGC TATTTTCTGG GGCAAGATCT TCATCTACTT
AAAAAAACGA TAGACAAATA CCATCCCTCA ATTAAACACA ATCAGCAAAT TAAAATTTAT
GAATCTAATA ATAACTATAG AAATACAGTT TTATATTTAA TCGGTGAAAT AACGGCTTTG
CCCAATATAA TTAATCATGA TAATCCTGTA GAATATTTTT CTTATTCAAT TAATCAATTA
ATGGTTAATT ATTTGTTTGA GCAATATGAA AAAGCGGTGA AATATGGAAA ATTAGCTCAC
TCTTATCTTA ATCATGTTAG AGGGACAATT GCTACCCCAG TCCTATATTT TTATGATTCT
TTAGCTCGAT TAGCACTCTA TTCTAACCGA GGTTTGTCTG AGCAACCAGA AATTTTAAGA
ACGGTCACTG AAAATCAAGA AAAACTCCAG ATATTTTCTG ATTATGTGCC TGAAAATTTT
GCTCATAAAT TCTATTTAGT CGAAGCCGAA AAAAATCGAG TTTTAGATAA TAAAGCTGAA
GCGATAGACT ATTACGATCG GGCCATTAGT TTAGCGAAAC AACATGACTA TTGTCAAGAA
GAAGCCTTAG CTCATGAACT AGCGGCTAAA TTTTATTTGT CCTGGGGGAA AGACAGAATA
GCTCAAACTT ATCTGACTGA TGCTTATTAT CTTTACAGTC GTTGGGGAGC AAAAGCAAAA
GTTAATCATC TCCTAAAACA TTACTCTCAA TTATTAGCCT CTCTCATCGA TCAAAATAAA
AAAATTCACA CAGACAATAA AATTTTACAA ACCTCAGCAG AAAAATTGAT TATCGATCAT
CAAGTCGGTT CAGCTATTCT TGATTTAGCA ACTGTTATTA AAGCTTCTCA AGCCATTGCC
AGTGAAATTG TTTTTAGTAA GTTATTAAGT AAATTAATAA AAATTGTCTT AGAAAATGCT
GGGGCACAAA TCGGATTTTT AATTCTTGAA AAAGAGGGTA AACTTTTTAT AGAAGCTCAA
GGAACTATTA AAAATAATCA GATAGTTGTC GAGGAATCAG TCAAGGGCAT CGATAGTCAA
AACTTGCCTT TATCTTTATT ATTTTATGTC CAAAGTTCTC AAAAAGATAT TGTTTTAAAT
AATGCCAGTG AAGACAAACT TTTTGCTACC GATCAGTATA TCATGGCTCA AAAGCCTAAA
TCAGTTTTAT GTACTCCCAT CTTAAATCAC GGTAAATTTA TTGGCTTGCT ATATTTAGAA
AATAATTTAA GTCCTGGAGT ATTTACCCCT GAGCGGTTAG AGATTTTAAA AATATTATGC
ACTCAAGCAG CAATTTCTCT GGAAAATGCT CAACTTTATG AAGAAATGAT GCTGTTAAAT
CAAAATTTAC AGCAAGAAAT TAAAGTTCGT ATTGCAGCCG AAGAAGCATT AAGGGAAAGT
CAAGAAAAAT TACAAGCTAT TATCGATAAT TCTCCTACAG TCATTTATCT TAAAGATTGT
CAAGGAAGAT ATATATTAGT GAACCGTCAG TTTAAACATA TTTTTCATTT AACCGATGAA
CAAATAGAAG GTAAAACAGA TTTTGAACTT TTTCCTCCTG ACTATGTCAA TTTGTTTGTC
AAAAATGACC AACAAGTTTT AAAAACTAAA AAATACATTG AATTTGAAGA GATAGCTCCT
CTAGATGATG GGGTTCATAC TTATCTTGCT GTTAAATTTC CTCTGTATGA CAAAACGGGT
GCTATTTACG CTGTTTGTGG AATTTCTACC GATATTACTG AACGAAAACA AGCTGAATTA
GAACGAATCC AATTTACTCA AGAATTATCT GATAAAAATG TAGCTTTAGA AATAGCTAGA
CAACAATTAG CTGAATATAG TCACACCCTA GAGCAAAAAG TCGAAGAAAG AACCGAAGAA
CTCTCCCATA CCCTAGAAAT TCTCAAAGCA GCACAAGCTG AATTATTGAT AGAAAATGCG
CTTTTAAGAA CTGAAGAAGA ACAAATAACT TATGAATATC AAGTAGGGGG AAGTTTACCC
ATTGATGCTC CAACTTATGT GGTACGACAA GCTGACAGAC AATTATATAA AGCCCTCAAA
CAAGGACAAT TCTGTTATGT TTTGAATGCG CGACAAATGG GTAAATCTAG TTTAAGAATA
CAAATTACAA AGCGTCTAAC CGCAGAAGGC GTAAAATGTG CGGCGGTGGA TCTTTCTATG
ATTGGAAGTC AAAATATTAC TATCGAACAA TGGTACACAG GCTTTACTTA TGTCTTAGCT
AGTGAGCTAA ATTTTTTAGA TTATGTTAAT ATTCGCAGTT GGTTGAAGGA ACATCAAGGA
TTATCTCCGG TTCAACGGTT ACGAGAATTT ATCTGCCAAA TTATTTTAAA ATCTGTCAAA
GAAAATATTG TTATTTTTGT CGATGAAATT GATAGCGTTC TCAGTTTAAA ATTTAAATTA
GATGACTTTT TCATTTTGTT GAGAAGTTTT TATAATCACC GTAGTGAAAC TCCTGAATTA
AATCGAATTA CCTTTGTTTT GCTAGGAGTA GCCCACCCCT CTCAACTGAT TCAAGACAAA
AATCGGACTC CTTTTAATAT TGGTAAAGCC ATTGAATTAG AAGGGTTTAA GTTATATGAA
GCTCAACCCC TTCTCTACGG CTTTAAAGAT CATGTTGACC AGCCCCAAGA AATTTTAAAA
GAAGTTTTAA ACTGGACAAA TGGACAACCT TTTTTAACTC AAAAAATTTG TCTTTTGATT
GGAGAATTAT CTAAATCTAG AGCAATTCCT AAAGCCAATG AATGGATTGA GCATTTAGTC
AAAACTGAAA TTATTGACAA TTGGGAAGCT AAAGATAATC CGGAACATTT AAAAACTATT
CGAGATCGTA TATTTACCAG CGAACACCCG GCTAGTCTCC TCAGATTGTA TCAAAAAATT
TGGCTTAAAG GCGAAGTCAG TGTTAATTAT AGTCCAGAAG AAAAAGAATT AATTTTATCG
GGATTAATTA TTAAAAAAGA AAATCAACTC CAAGTGAAAA ATAAAATCTA TTATCAAATT
TTTAATGCTG ATTGGATTGA GCGAAACTTA AATAATGGCT TATTAAAGAG TTGA
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| Protein sequence | MIVNSMKNIP GYIITQKVCD HSPILVYRGQ RIEDQESVII KTLPSDYPTL EEITWIKQDY
LIGKSLNLPG IVKPHQFIHH QNIFAIILED FGGISLSYFI QEKTLSLTQK LKIALAVAEI
LDQLHKVPII HKDLNPANIV VNLETQEIKI TDFIIASRLE FEKQCLSHHH FLQGTLAYMS
PEQTGRMNCS LDYRTDIYSL GVTLYEMFTG SLPFSTSDPV ELIHCHIAKK PVYPSLLNPQ
LPQSISDIIM KVLAKNPDER YQSAKGLKFD LETCLLQLQS DKNIKGFTLG ERDHKTQLLI
SQKLYGREKE VNTLIKAFER VSQGRKELTL ISGYSGIGKT SIINAIHHPI LEAKGLFISG
KFDPLKTNIP YSAFREAFQG LLENLLTEKQ ERIENWRKNL SNILINNGQI IINIIPEIEF
IIGKQPQVTA LDPSNSYHRF NEVFKNFINV FCQPEHPLVI VLDDLQWIDA ESLKLIEMLM
TDDRIKYLFI VGAYRDNEVN ITHPLSRTLE KIKAKKSVIH SMVIEPLSCP DVLHLLIDTF
DQTQIKENLY YLAEIIYHKS RGNPFYINQF IKKIYKNQLI YFDQTTDQWS WNLEKIQNFN
LSDQSLSELM AISLSTLPSQ TQNLLKFAAC IGNKLQLTEL AIITEKTEIE VAHQLWPALQ
AGLIIPCSEQ YKIPLVFDLT ETENDSIKNL EAEYQFLHDQ VQQSAYSLIP PQEKPLTHVK
IGRLLLENIP SEFKEERIFE IVNHLNLGIK LISTQKEKNQ LAELNLIAGR KAKDSTAYKT
AIEYFRLGLK LLAVDSWQTQ YRLTLALYEE TAETAYLIGE FEKTQKLIKL VFQQAETLLD
KIKSYEIKFQ VYIAENRLGE AIKSSIPVLK WLGVDFPETL TEDNIRQTLQ EIQTTLAGKS
IADLVNLPLM SDPCKLAAIK IMVRVGTAAY QGKPDFFLLI VLKEINLLLK YGNTDESAFI
YACYGLILIE ITGNIEQGYQ FGQLALTLLE QKTTKKVEAR TLLMVYSYIF YRKHHLKETL
EGLVKGYRSG LENGDLEFAS FIAHFYCFSC YFLGQDLHLL KKTIDKYHPS IKHNQQIKIY
ESNNNYRNTV LYLIGEITAL PNIINHDNPV EYFSYSINQL MVNYLFEQYE KAVKYGKLAH
SYLNHVRGTI ATPVLYFYDS LARLALYSNR GLSEQPEILR TVTENQEKLQ IFSDYVPENF
AHKFYLVEAE KNRVLDNKAE AIDYYDRAIS LAKQHDYCQE EALAHELAAK FYLSWGKDRI
AQTYLTDAYY LYSRWGAKAK VNHLLKHYSQ LLASLIDQNK KIHTDNKILQ TSAEKLIIDH
QVGSAILDLA TVIKASQAIA SEIVFSKLLS KLIKIVLENA GAQIGFLILE KEGKLFIEAQ
GTIKNNQIVV EESVKGIDSQ NLPLSLLFYV QSSQKDIVLN NASEDKLFAT DQYIMAQKPK
SVLCTPILNH GKFIGLLYLE NNLSPGVFTP ERLEILKILC TQAAISLENA QLYEEMMLLN
QNLQQEIKVR IAAEEALRES QEKLQAIIDN SPTVIYLKDC QGRYILVNRQ FKHIFHLTDE
QIEGKTDFEL FPPDYVNLFV KNDQQVLKTK KYIEFEEIAP LDDGVHTYLA VKFPLYDKTG
AIYAVCGIST DITERKQAEL ERIQFTQELS DKNVALEIAR QQLAEYSHTL EQKVEERTEE
LSHTLEILKA AQAELLIENA LLRTEEEQIT YEYQVGGSLP IDAPTYVVRQ ADRQLYKALK
QGQFCYVLNA RQMGKSSLRI QITKRLTAEG VKCAAVDLSM IGSQNITIEQ WYTGFTYVLA
SELNFLDYVN IRSWLKEHQG LSPVQRLREF ICQIILKSVK ENIVIFVDEI DSVLSLKFKL
DDFFILLRSF YNHRSETPEL NRITFVLLGV AHPSQLIQDK NRTPFNIGKA IELEGFKLYE
AQPLLYGFKD HVDQPQEILK EVLNWTNGQP FLTQKICLLI GELSKSRAIP KANEWIEHLV
KTEIIDNWEA KDNPEHLKTI RDRIFTSEHP ASLLRLYQKI WLKGEVSVNY SPEEKELILS
GLIIKKENQL QVKNKIYYQI FNADWIERNL NNGLLKS
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