| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2494 |
|---|
| Symbol | |
|---|
| ID | 7111412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 2771186 |
|---|
| End bp | 2775775 |
|---|
| Gene Length | 4590 bp |
|---|
| Protein Length | 1529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643480747 |
|---|
| Product | putative methylase/helicase |
|---|
| Protein accession | YP_002377779 |
|---|
| Protein GI | 218439450 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.207281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA CAGAAATTAA ATCAACTGAA CTTTTTACAG ATCGCTTGGC TCAAATCGAT
GAAGAAACAG AAAGATTCAG CGAGATCGCA TCCCAACTCA CAACCAAACG TCAGCAACTT
ACTCTATTAT TTAACAAAGC AACTACAGCA GTTGAAGCGA TCGGAGAATT GACGAATGTG
CTTCCTCAAA CCACTTCAGA AATTCGAGCC GCTTTAGAAG CTATCTTTGA ACAAGACCAA
CCTGTTTGTG AAGCCAAACA GCCAGCCTCA ACTAACCCAT TGATCGAGGT AGGGCATCAA
CTTCTACCAA TTCTACAACA GGGACAGCCA ATCACCAACG CTACCGTCTC CGGTTTGATG
ACTCAAAACT TTGGAGGGTC TGATGCACAA GGATGTTGGC TCTGGAAAGA TGCCTATGAA
GCCTTAGAAA TTGCCCAAAT CTTGCTCATT CAACAGCAGG GCAGAGAAAT TCTCAATCAA
TCGAATCACT TAGCCATTTT TAATGAAATT GAGCGAATAC ATCGACTCTG CCCCACTCAA
ACCCGACGCT CCCAGACATC GATTCAGTTG CAGCAGTTTT CTACCCCTCT TCCTTTGGCT
TATATTGCTT CACTAGCGGC ACAAATTACT CCCGATGACC TCGTATTAGA ACCCAGTTCA
GGAACGGGAA TTTTAGCGAC TTTTGCTTGT GTTAATGGGG CGCAGTTAAT TCTCAACGAA
ATTTGTCCTC AACGTCGAGG CATTCTAGGG GAAATATTTC CTCAAAGACC TTTATTCAGT
TATAATGCCG AACAAATTGA CGATTATCTT GAGGGGAAAT ATCATCCCAC TGTGGTGGTA
ATGAATCCGC CATTTACCGC TTCCCCGAAG ATGGCAAAAC GTAATCAGTT TGCTACCCTT
AAACATTTAA GTTCAGCATT AGCAAGACTA TCACAAGGAG GGCGTTTAGT CATCATTACC
GCTAATTGGT TCTCCCCTCT AAATCCTCAA TGGCGAGATA GCTTTATTAA ACTACAACAA
TCGGCAAAAG TTGTCTTTTC TTGTCCAATT GAGGGAAATG CTTATGCTAA ACATGGAACA
ACGGTTGAGA CTCGTTTAAC AGTATTTGAC AAAATTTCAT CTGCTCAACC CGATGAGTTT
GTTAACTGCT CCCTTGAAGC TGTTTCCCTA TCTGGATTGC TCAACTTGGT AGAAAGCCTT
GTCCCGAAAC GTCAAGCACT TACTACTATA ACTGGAGCAA AAGCCAACAC GCTTTCTCCT
GAATCGGTCA ATCAAAGAGG AAAGTTTCCA AAAGATTCTT ATAAGATCGC CACATCCCCT
AAAGCCAAGC AATCTAAAAC CCAACAGCCA GAAGCCAACT TACAAGATAA GCCAAACGGA
GTATCTGTTG AGGATGTAAT AGAAATCGCT TATACCACTC GTGAGTGGAC TGGAAGCGGA
CGAGAGATAT CTGATAGTCT TTATGAAGCT TACGAACCCC AGACTATACT AATTGAAGGA
GCAATTCAAC ATCCATCGCC TCTGGTTCAA AGTGCGGCAA TGGCTAGCGT AGCCCCACCG
AAGCCGCTTT ATCGACCTCG CCTTATGCGA TCGCTTATCA CCGGAGGGAC ACTCTCTGAT
GCTCAACTAG AATCAGTTAT TTATGCAGGA GAGTCTCATA GTCAATTTCT CAAGGGTAAC
TATCAAGTTG ATGACACCCT AGATATTGTT TCTGTAGCTA CCCAAGAAGA TGCTTCTGTC
AGATTTCGTC GAGGCTACTT CATCGGAGAT TCGACTGGCG TAGGTAAAGG CAGACAGGTA
GGCGCTATCT TATTGGATAA TTACCTACAG GGACGCACTA AAGGGATCTG GATCTCCAAA
TCTGATACCC TACTCGAAGA TGCAAGACGA GATTGGACAG CATTGGGGGG CAAAACCGAG
CAAATCATTC CCTTAAGCAA ATTTCGGCAA GGTGAACCGA TTGAACTGAC ACAAGGCATC
ATCTTTGTCA CCTATGCCAC CCTTCGCACC GAAGCCAAGC AAGGTAAGAA ATCTCGCGTC
GAACAGCTTA TCGATTGGTG TGGTAAGGAT TTTGAGGGGG TAATCGTCTT TGATGAAGCG
CACTGCATGG CCAACGCTTG CCCAGAAATG GGAAAACGAG GCATCAAAAA GCCTTCCTTA
CAGGGACTCG CCGGATTGAG ATTACAGCAC GGATTACCAA GAGCCAGAGT CCTGTATGTT
TCCGCAACCG GAGCAACGAC CATTAATAAC CTCGCCTACG CTCAACGGTT AGGATTGTGG
ATGAGTGAAG AGTTCCCCTT TGCCAGTCAA GAGGATTTTG TCGCCGAAAT GGACAAAGGT
GGGATTGCTG CTCTAGAAGT GGTTTCACGG GATCTTAAAG CCCTCGGACT CTATACGGCG
CGATCGCTAT CTTATCAAGG TGTAGAGTAT GACATCCTAG AACACCAGTT AAGCGATGAA
CAGATTAAAA TTTATAACGC TTATGCTGAT GCTTTCCAAA TTATCCATCA AAACCTAGAA
TCTGCCCTAA AAGCGACGAA TATTAGCAGT CTCACCGGAA GAACACGAAA TAGGAATGCT
CGTAGTGCTG CTCGTTCTGC CTTTGAAAGT AATAAACAGC GATTTTTCAA CCATCTGATT
ACCTCGATGA AGTGTCCGAC CCTTCTAAAA GCGATCGAAC AAGATTTAGC CCTTGGTCAC
TGTGCTATCA TTCAAATTAC CTCAACGGAT GAGGCTCTCT TAGACCGAAG ATTAGCAGAC
ATCGGGACTT CCCAGTGGCA TGATTTACAG GTGGACATCA CACCGAGAGA ATATGTCATG
GATTACCTGA TGCACTCGTT TCCCGTCCAA TTACACGAAA TTTACACCGA CGAGCAAGGT
AATGAATATT CTCGTCCCGT CACCGATAGC GAGGGAAACC CAGTTTTATG TCAGGAAGCC
TTAAGACGGC GAGAGGAACT GATTGAACGC TTGGGGCTGT TACCGCCGGT TCCTGGGGCA
CTCGACCAGA TTATACAACA TTTTGGCTAT GAAAATGTAG CAGAAGTGAC GGGACGCTCT
AAACGCATCG TGAAGGAAAC TAAAGGAGAG CGAGAAAAGC TAGTCTTACA GAAGCGTTCG
GGTTCAGCCA ATCTGTCCGA AACCGGGGCA TTTATGGACG ATAAAAAGCG TATTCTGATA
TTTTCGGAAG CTGGAGGTAC AGGCAGAAGT TATCACGCTG ACCTCAAAGC CAGAAATCAA
CGCCTACGAG TCCATTACCT CTTAGAAGCC GGTTGGAAGG CAGATTCAGC CATTCAAGGG
TTAGGGCGCA GTAATCGGAC AAATCAGGCT CAACCGCCTT TATTCCGACC TGTTACTACC
AATGTTAAGG GTGAAAAGCG ATTTCTTTCA ACTATAGCCC GTCGCTTGGA TTCTTTGGGG
GCATTGACAA GAGGACAGCG ACAGACAGGA GGACAGGGAT TATTTCGAGA ACAGGACAAT
TTAGAATCTT CCTACGCTAA AGCCGCATTA CGACAACTGT ATCTGGCACT CTACTACGGG
AAGATTGATT GCTGTTCTCT AAAAGATTTT GAAGCATACA CGGGACTTTC TTTGACCACT
CCTGAAGGTA ACCTCAAGGA AGAGTTACCG CCGATTTCCC AATTCCTCAA CCGTGTCCTG
GCTCTACGGA TTGAACTGCA AAATGCTTTA TTTGAAGAGT TTGAGGTCAG ATTGGAGAGT
AAGATCGAGG AAGCTATAGC TACGGGAAGC TATGAAGGGG GAGTAGAAAC CCTCAAGGCT
GACAACTTCA GGGTTTTAGA GCATCAAGTC ATCTATACTC ACCCGAAAAC TGGGGCACAA
ACCGACTGCG TCAAAATTGA GCGTAAGCGT AAAGCTGGTG TTTTGAGACT TCCTGAAGCT
TTAGAAATGT ACCAAAACTA TCAGGGAAAA TTGGTAGTTA ATGAGCGCTC CGGTCGAGTA
GCAATTGCCG TCCCTACAAA TAGCACAGTA ACCGATGACG GGGCAATTGT GCGTCGAATT
AATTTAATTC GTCCAGCATC GAACGAAAAG ATGAGTCTTG ACCAATTTCG GGCTTCCACT
TGGGAGGAAA CAACTGGGGA AACTTTTAGT CGTCTCTGGC AGCAAGAAGT GGGTAACGCC
CCTGAGTTTG AAGTTGATTC ATTTTACTTA ATTACGGGTT TATTACTTCC GATTTGGAAT
CGATTGGATG CTCTTAATAT GCGGGTCTTC AGGCTACAGA CCGATAGCGG GGAGAAATTG
CTTGGTCGAT TAGTCCATGC GGAGAATATT GCTTCTGTCT TCCGTAATTT AGGCATTACC
CATACTCCTA AACTAACGGC TGATGAGGTT TTCCACGCCG TTACCCAGCG TAAGGAAGTG
ATGCCGTTAG TACGAGGCTG GCAATTACGT TCATCCTCTG TCATGGGCAA CCAACGCTTA
GAAATTACAG GTGTTCGCCA ACAGGCAGAA GTAATGTGCC TAAAAGCCCT TGGCTGTATG
ACAGAAATGA TTAATTGGAA GCTACGAGTC TTTATTCCCA TGAATGAAAA AGCCACAGGA
ATTATCGAGA AAATACGCTC TTTAGCATAA
|
|---|
| Protein sequence | MKLTEIKSTE LFTDRLAQID EETERFSEIA SQLTTKRQQL TLLFNKATTA VEAIGELTNV
LPQTTSEIRA ALEAIFEQDQ PVCEAKQPAS TNPLIEVGHQ LLPILQQGQP ITNATVSGLM
TQNFGGSDAQ GCWLWKDAYE ALEIAQILLI QQQGREILNQ SNHLAIFNEI ERIHRLCPTQ
TRRSQTSIQL QQFSTPLPLA YIASLAAQIT PDDLVLEPSS GTGILATFAC VNGAQLILNE
ICPQRRGILG EIFPQRPLFS YNAEQIDDYL EGKYHPTVVV MNPPFTASPK MAKRNQFATL
KHLSSALARL SQGGRLVIIT ANWFSPLNPQ WRDSFIKLQQ SAKVVFSCPI EGNAYAKHGT
TVETRLTVFD KISSAQPDEF VNCSLEAVSL SGLLNLVESL VPKRQALTTI TGAKANTLSP
ESVNQRGKFP KDSYKIATSP KAKQSKTQQP EANLQDKPNG VSVEDVIEIA YTTREWTGSG
REISDSLYEA YEPQTILIEG AIQHPSPLVQ SAAMASVAPP KPLYRPRLMR SLITGGTLSD
AQLESVIYAG ESHSQFLKGN YQVDDTLDIV SVATQEDASV RFRRGYFIGD STGVGKGRQV
GAILLDNYLQ GRTKGIWISK SDTLLEDARR DWTALGGKTE QIIPLSKFRQ GEPIELTQGI
IFVTYATLRT EAKQGKKSRV EQLIDWCGKD FEGVIVFDEA HCMANACPEM GKRGIKKPSL
QGLAGLRLQH GLPRARVLYV SATGATTINN LAYAQRLGLW MSEEFPFASQ EDFVAEMDKG
GIAALEVVSR DLKALGLYTA RSLSYQGVEY DILEHQLSDE QIKIYNAYAD AFQIIHQNLE
SALKATNISS LTGRTRNRNA RSAARSAFES NKQRFFNHLI TSMKCPTLLK AIEQDLALGH
CAIIQITSTD EALLDRRLAD IGTSQWHDLQ VDITPREYVM DYLMHSFPVQ LHEIYTDEQG
NEYSRPVTDS EGNPVLCQEA LRRREELIER LGLLPPVPGA LDQIIQHFGY ENVAEVTGRS
KRIVKETKGE REKLVLQKRS GSANLSETGA FMDDKKRILI FSEAGGTGRS YHADLKARNQ
RLRVHYLLEA GWKADSAIQG LGRSNRTNQA QPPLFRPVTT NVKGEKRFLS TIARRLDSLG
ALTRGQRQTG GQGLFREQDN LESSYAKAAL RQLYLALYYG KIDCCSLKDF EAYTGLSLTT
PEGNLKEELP PISQFLNRVL ALRIELQNAL FEEFEVRLES KIEEAIATGS YEGGVETLKA
DNFRVLEHQV IYTHPKTGAQ TDCVKIERKR KAGVLRLPEA LEMYQNYQGK LVVNERSGRV
AIAVPTNSTV TDDGAIVRRI NLIRPASNEK MSLDQFRAST WEETTGETFS RLWQQEVGNA
PEFEVDSFYL ITGLLLPIWN RLDALNMRVF RLQTDSGEKL LGRLVHAENI ASVFRNLGIT
HTPKLTADEV FHAVTQRKEV MPLVRGWQLR SSSVMGNQRL EITGVRQQAE VMCLKALGCM
TEMINWKLRV FIPMNEKATG IIEKIRSLA
|
|---|
| |