| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2264 |
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| Symbol | |
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| ID | 7111332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 2523862 |
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| End bp | 2526171 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643480522 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002377554 |
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| Protein GI | 218439225 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00121216 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTCTT TAAATGATCT TTCCTCCTTT ACTCTGCCTC CTTTTGCCAA TAAACTGATT
CAATCAGGGT ATATCAACTT GCCCCAAATA CAGCAAGCTT TGATTGAAAA GAAAAAAACC
GGGCGTTCCT TATTGGAAAT TTTACAAGAG ATAGCCGGTA AGCCACTTCC GTCAGAGTTT
GTCCGTCAAC ACAAAAAGGA TCACCTTTTT AACCTAAAAA TCTTGTATGG GATTGATGTT
TTCGATCCAG AAACCTATTC CTTTGAGTGG AAACAGGTAG AGGAACTGAT CGATACTTTA
ATTCCTCTAG AGATCTGCCG TCGCTATAAA TTATTACCTC TCAAAAAACG CAATCAACAG
CCCCCTTCAA TTGTTGTCGC TTTAGTTAAC CCAAAAGATC CAGAAACCCT TGATACCCTG
AAACAGATTT TGCGGCCTAA ACAGATGAAA TTAGCCCGTA AAGTTATTAC TCAACAAGAT
TATAATCAGT TAATTGAACA GTATTTAAAC CAACTCCACT CGGAAGAATC TATTCAAATT
CATGTTGCTG AACAAGATTT AGAAACCTTG GTTGATGTTA GTGATATATT TGAAGATGTT
TCCCAGAGTT TAAGAAATTC AAACCTGAAA ACTCAAGATA ATCAGAGTTT GGGGACTCAT
GACGATCAAG GGCCAGTCGT CACATTAGTT AATAATATAC TAGCCAGAGC TTTAGAAAGT
AAAGCCTCAG AAATTCAGAT CGAACCTCAC GATCATCATT TAAATGTTTT ATTTCGTCAA
GATGGGATAA TTGCTCAGGC TTTTGATCCC ATTCCTAAAG AGATTGCTGC TGCGGTTGTT
TCTCGGTTTA AAACCCTGGC TAATTTAGAT ATTACTCAAT TTGATACGCC GCAAAAAGGG
ACGATGCAGA AATCGTTTTC AGGACGTAAA ATTGATTTTT GGATTAGTAC CTTACCGAGT
CGTCACGGAG AAAAAATTAT TATCCGAATT TTAGACCCGA AAGCTATTTC ATTAGATTTA
GAAACCTTAA TTAGTAATCA TAATACTAGA CAATTAACGA AACATCTTGT CAGTCGGTCT
TCGGGCTTAT TTTTAATTAC TGGCCCTGAA AGTTCAGGAA TTTCAACTAC GTTTTATGCT
GTACTCGCAG AACGAAATCG ATTAGGAGTC AATTTAGCCA CCGTAGAAAA TTCCATCGAA
CAGACTTTAT CCGGTGTTAA CCAAGTCGAA ATTAATGACG AACACAGAAA AGATTCTAAT
GAGGTACTGT TGTCTTTTCT CAATCAAGGT GTGGACGTGA TTGGACTCGA TCAAATTCGG
GGCAAAAACA CCGCTAAAAC AGTCGTTGAA GCCGCACTAA GTCATTTAGT GATTACTACT
TTACCCACCC CAGACACAGC AAATGGTATT GTTCGGTTAA CTAAAATGGG TGTAGATGCT
TCTCTGTTAA GTGAAACCCT AATTGGTGTC ATCAATCAAC GATTAGTGCG TCGTGTTTGT
CCGGTTTGTC GTCTGAGTTA TAAACCTAAT TCCTCACAAT TATCTAAATT CCCTTCACTG
TTTTCCAAAC AAAAAAAAGT CACCTTTTAT AAAGCAAATG TTTTAAACTC ATCCCAAAAA
GAACTGGCTA GTTCTAAAGG TCGATTATGT CGTCACTGTA ATGGACTGGG ATATAAAGGC
CAAATCGGAG TTTATGAAGT AATGGGAATT AGCCAAAGAT TAAAGACGTT AATCTCTCAA
GAGGCTGATG CAGAAACCAT TAAACAAGCT GCCATTCAAG AAGGGATGAC TTCTCTCCTC
TCTTATGCAG TAAATTTAGT CAGAGAAGGT CACACCACTT TAGACGAACT AGAGCGAGTT
TTTCCGGATT TATTAGATTT TAATGCGATT CAATTTTGTG AGCAATTAAA AGTATCGGCA
TCACCGGAAT TTATGCGTCG TTTGCATAAA ATGGAGAAAC TTTTAGAAGC TGTGAATCGG
GAATTTAATC AACTTAAACA GGATTTAATC GTGACTACCG AGTCAGAGCC TAACAGGGAT
ACCGCTATTT CTTCCCGTTC AGAATTATCC GAATTAAGGG AGTCTGACGA ATTAGAAACC
CTGAAAAAAG AACTGGAATT TGATAAAGAA ACGATGATTA CAGCGACAGA TTCCCAAAAA
GATCCAGCAG TCTTAGAGCC GGATGAATTG GAACTAGAAC TGCTTAAAAA AGAATTAGAA
TCTGATAAAG AAACTGTTAT TTCAGCAGAT GATTTTAAGG ATGATGAGGA GGAACAACAA
CAAGTTCAGT TTGTTCCCGA TCCTTGGTAA
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| Protein sequence | MSSLNDLSSF TLPPFANKLI QSGYINLPQI QQALIEKKKT GRSLLEILQE IAGKPLPSEF
VRQHKKDHLF NLKILYGIDV FDPETYSFEW KQVEELIDTL IPLEICRRYK LLPLKKRNQQ
PPSIVVALVN PKDPETLDTL KQILRPKQMK LARKVITQQD YNQLIEQYLN QLHSEESIQI
HVAEQDLETL VDVSDIFEDV SQSLRNSNLK TQDNQSLGTH DDQGPVVTLV NNILARALES
KASEIQIEPH DHHLNVLFRQ DGIIAQAFDP IPKEIAAAVV SRFKTLANLD ITQFDTPQKG
TMQKSFSGRK IDFWISTLPS RHGEKIIIRI LDPKAISLDL ETLISNHNTR QLTKHLVSRS
SGLFLITGPE SSGISTTFYA VLAERNRLGV NLATVENSIE QTLSGVNQVE INDEHRKDSN
EVLLSFLNQG VDVIGLDQIR GKNTAKTVVE AALSHLVITT LPTPDTANGI VRLTKMGVDA
SLLSETLIGV INQRLVRRVC PVCRLSYKPN SSQLSKFPSL FSKQKKVTFY KANVLNSSQK
ELASSKGRLC RHCNGLGYKG QIGVYEVMGI SQRLKTLISQ EADAETIKQA AIQEGMTSLL
SYAVNLVREG HTTLDELERV FPDLLDFNAI QFCEQLKVSA SPEFMRRLHK MEKLLEAVNR
EFNQLKQDLI VTTESEPNRD TAISSRSELS ELRESDELET LKKELEFDKE TMITATDSQK
DPAVLEPDEL ELELLKKELE SDKETVISAD DFKDDEEEQQ QVQFVPDPW
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