| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2019 |
|---|
| Symbol | |
|---|
| ID | 7109487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2275123 |
|---|
| End bp | 2275992 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643480277 |
|---|
| Product | Prephenate dehydrogenase |
|---|
| Protein accession | YP_002377317 |
|---|
| Protein GI | 218438988 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTA TTGGACTTGT CGGACTAGGG TTAATTGGCG GATCTCTGGG ATTAGATTTA
CGGTCTCAAG GATTAGAGGT ATTAGGAGTT TCTCGAAAAG AAACCACTTG TCAAATCGCT
AAAGAACGAG GGGCTGTTAC TGAAGCCAGT GTAAACTTAG AAATATTAAA CAGAGCAGAT
ATTATTTTTA TTTGTACTCC GATCGCCTCG ATCATCTCAA CCCTAGAGCT ACTCCTTCCC
TATCTTAACC CCGAAACTAT TATTACAGAT GTCGGCTCAG TGAAAGCTCC GATTGTCAAA
AAATGCTCTC AACTCTGGGG GAATTTTGTT GGGGGACATC CAATGGCAGG AACGGCAGAC
CAAGGCATTG AAGCAGCACA ATATGAGTTA TTTGTCAATG CCCCTTATGT AATTACTCCC
CTAAAAACCA CTCCGCCAGA AGCCGTGAAA AAAATAGAGG ACATAGCGCG ATCGCTCAAG
TCAGTGGTTT ATAGTTGTTC TCCTGCTCAA CATGATCAAG CGGTGGCCTG GATCTCCCAT
TTACCCGTGA TGGTGAGTGC GAGTTTAATT GATGGGTGTA TGAAAGAAAA AGATTTAGAG
ATACTGACAT TAGCCAAAAA TTTGGCCAGT TCTGGGTTTA GAGATACCAG TCGAGTGGGG
GGAGGCAACC CAGAATTAGG AGTGATGATG GCTCGTTACA ATACGGATAG CCTATTGCGA
TCGCTTAAAC AGTATCGGAA AAGCTTAGAT CAGATTATTG ATGTGATTAA AGACGAAAAA
TGGGAAAAAT TAGCCAAAAT TCTCACAAAT ACTCAGGAAG CTAGAACCGA ATTTACGGAG
AATAAAATCA ATAAGTCACA AGAACAATGA
|
|---|
| Protein sequence | MTTIGLVGLG LIGGSLGLDL RSQGLEVLGV SRKETTCQIA KERGAVTEAS VNLEILNRAD
IIFICTPIAS IISTLELLLP YLNPETIITD VGSVKAPIVK KCSQLWGNFV GGHPMAGTAD
QGIEAAQYEL FVNAPYVITP LKTTPPEAVK KIEDIARSLK SVVYSCSPAQ HDQAVAWISH
LPVMVSASLI DGCMKEKDLE ILTLAKNLAS SGFRDTSRVG GGNPELGVMM ARYNTDSLLR
SLKQYRKSLD QIIDVIKDEK WEKLAKILTN TQEARTEFTE NKINKSQEQ
|
|---|
| |