Gene PCC7424_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1997 
Symbol 
ID7109465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2249759 
End bp2252119 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content47% 
IMG OID643480255 
ProductHemolysin-type calcium-binding region 
Protein accessionYP_002377295 
Protein GI218438966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.177214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCT TTACCGTTAC TAATTTGCTA GATAATGGAA AGGGAAGTCT CCGACAAGCC 
ATTGCCCGTG CAAACAGTTT AGAAGGCACA GATATCATTA AATTTTCCCG TAATCTCAAA
GGTAGCACTA TCACTTTAAC CAGTGGGGAA TTATCGATTA CTGATTCTGT CACTCTTAAG
GGTTTAGGGG CAGAGTGGTT AAAAATTAGT GGCAACGATA GCTCCCGGAT ATTCAACATT
GATGATGGAA GTGATCAAAT CCTTGAGGTG CTGATTTCGG ACTTAACTCT AACTGAGGGA
CGTACCACAG GTTCAGAAGA CTTCGCCGCT AGAGGCGGAG CTATTTTCAA CGCGAATGAA
ACCTTAACTT TAATTAATAC TTCGATTACT GGCAGCACAG CGCAAGGAGC GTCGGTTGAT
TTCTATGATT ACTATAATGA TACAACCTGG TCTGGGGGAG GGGCAATTTA TAACTCATCC
GGTAACCTAA CCATAATTAA CAGTGTTATC AGTGGCAATA CAGCCAAGGG CGGTACTTCC
TATCAACAAT ATCAATATCT ATACGCTGGA GGTAGCGCAA GCGGAGGAGG TATTTTTAAT
GCGACAGGCA ACCTAAGCGT GACTAACAGT ATTATTAGTG GCAATACTGC AATAGGGGGC
GATGGTGAAT TAGGAGGCAG TGGTCATGGG GGTGGGATTA GTAACCGGGG AAGTTTAACG
GTAACTAATA GTATTATCAG CGATAATACA GCAGAAGGAA GTTATGGCGA TGGGAGTGCC
TGGGGGGGTG GTATTGAGGG ATCAAACATA ACAGTCAATA ACAGCACCAT TAGCAATAAT
ACAGCGATAG GAGGTCGTGG CCGTCAAGGA ATAAGATATC GTTCTATTGA GCCTTACGCC
GGTTCTATCG GAGGCTATGC TTCAGGAGGA GGCATTCTGG GAGCGAACCT GATAGTAAAC
AATAGTACCA TCACCGGCAA TACAGCTATA GGAGGTGAAG GGGGTAGGGG AGCTTATGGA
TATAACTCTA GCTACCTTGC CCTTGCTGAG GGGGGTGATG GTGGCACAGG CGGCCAAGCT
AGAGGCGGTG GCATCGGGAT CATGGGTATA AGTTCGATTG CAACAATCAG CAACAGCACG
ATTAGCGGAA ATACAGTAAT CGGGGGTAAT GGAGGAACAG GAGGTTCTGG CGCTCTTTTT
TATATTGATG ATAACTCTTA CGATGCCGGA GATGGTACAG ATGGTGAGGG AGGCAGTGGT
ACAGGAGGCG GAATTTGGGC AATTTATGCT CATTTGACGA TTACTAATAG CACCATTACC
CAAAATTCAG CACAAGGTGG GATGGGTAGC AGCAACGGTC AAACCGCAGG TGCAGGAGTG
ATTACCGAGA CACAACTTAG TGGTAACAGC ACGCCAATAA CTCTGACCAG CACTATCATT
GCCGGCAACA CTGATAATCA AGATGTGGCC GGAACTTTTA CATCTGGCGG CTACAATTTG
ATTGGCAATG GTGAAGACTC AACAGGTTTA ATTGATGGAG TTAATCACGA CCAAGTCGGA
ACAACCGCTA ATCCGATTGA CCCTCTGTTA AGTCCTTTGC AAGATAACGG TGGCCCCACT
CTGACTCATG CTCTCCTGCC GGGAAGTCCC GCCATTGATG CAGGGAATAA CGACTCCAAC
CTAATCAGTG ATCAACGAGG CGCACCGAGG GTTGTGGGAG ATGCGGCAGA TATTGGAGCG
CTTGAGGTAG CCGATCAAAC CTTACTGGGG AATGAAAGCT CAAATAGCTT CACAGGCGGA
GCGGGTAACG ATTTCTTAGA GGGTGGAGAC GGAAATGATA CCCTCAATGG GAGTAAGGGA
AATGATGGGT TAAGAGGAGG AGCCGGCAGC GATCGCTTAA TGGGTTCAGA CGGGAATGAT
CTCCTCATTG GCGGACTCGA GCGAGACATT CTTGCAGGAG GTGAAGGGGC GGATGTGTTC
CGCTTTGAGT CTTTAGCTGA TTCAAGCTTG CTGAGTCCAG ACCGGATCAG GGATTTCAAC
CAAACCGAGG GAGACCGATT TCAATTGCTC CCTACTAATC CAAGTACCTT ATGGAATGCA
GGGGACGTTA CAGGAGATAA TCTGAGGGTT GCCCTTGAAG CGGCTTATGC CGATAGCAAT
CAAAGTGCAG GGGGGAGTCA ACCCTTGGGA CTCAATGAAG CAGTCTTGTT TAATTTTGGC
TCTCGAAGTT ATTTATCGAT CAACAACACC ATAAGTGGAT TTAATCCCGA ACAGGATTTA
GTCGTAGAAG TATCCGGAAT TGTCTTAGCT TCGGGAGATG AAAATGCCGG AGTTTTGAGT
GTAAGTGACT ATTTTGTCTA A
 
Protein sequence
MAVFTVTNLL DNGKGSLRQA IARANSLEGT DIIKFSRNLK GSTITLTSGE LSITDSVTLK 
GLGAEWLKIS GNDSSRIFNI DDGSDQILEV LISDLTLTEG RTTGSEDFAA RGGAIFNANE
TLTLINTSIT GSTAQGASVD FYDYYNDTTW SGGGAIYNSS GNLTIINSVI SGNTAKGGTS
YQQYQYLYAG GSASGGGIFN ATGNLSVTNS IISGNTAIGG DGELGGSGHG GGISNRGSLT
VTNSIISDNT AEGSYGDGSA WGGGIEGSNI TVNNSTISNN TAIGGRGRQG IRYRSIEPYA
GSIGGYASGG GILGANLIVN NSTITGNTAI GGEGGRGAYG YNSSYLALAE GGDGGTGGQA
RGGGIGIMGI SSIATISNST ISGNTVIGGN GGTGGSGALF YIDDNSYDAG DGTDGEGGSG
TGGGIWAIYA HLTITNSTIT QNSAQGGMGS SNGQTAGAGV ITETQLSGNS TPITLTSTII
AGNTDNQDVA GTFTSGGYNL IGNGEDSTGL IDGVNHDQVG TTANPIDPLL SPLQDNGGPT
LTHALLPGSP AIDAGNNDSN LISDQRGAPR VVGDAADIGA LEVADQTLLG NESSNSFTGG
AGNDFLEGGD GNDTLNGSKG NDGLRGGAGS DRLMGSDGND LLIGGLERDI LAGGEGADVF
RFESLADSSL LSPDRIRDFN QTEGDRFQLL PTNPSTLWNA GDVTGDNLRV ALEAAYADSN
QSAGGSQPLG LNEAVLFNFG SRSYLSINNT ISGFNPEQDL VVEVSGIVLA SGDENAGVLS
VSDYFV