Gene PCC7424_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1758 
Symbol 
ID7110416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1961298 
End bp1963049 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content38% 
IMG OID643480020 
Productdiguanylate cyclase with Chase2 sensor 
Protein accessionYP_002377061 
Protein GI218438732 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.621597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCAA GATTGAGGCA AAATATAGCC CATTGGCAAG GAATAATCAT TACAGCACCG 
TCTATAGTAG CTGTTGCCTT CCTCGGCAAT ACAGCCGGTC TTTTCCAGAT GCCAGAAATA
GCTATCTATG ACCATTTTAT GAATTGGCGA CCCCAAGAAA CAGCCGACCC TAGAATTACT
GTGGTAACAA TTGATGAGTC AGACTTAGAT CAATATAATT TTCCCATACC CGATCATAAA
CTAGCACAAG CGATTAAGAT TATTAAACAA CAAAAACCTA GAGCGATTGG TTTAGACATT
TATCGAGATT TGCCAGTTAA TCCAGGCTAC GAACAATTAA TCGCAGAATT TGCCACTACA
GATAATTTAA TAGGAATTGA AAAAGTCATA GGGAAAACCG ATAGTGAATT AGTAGATCCT
CCTCATACTA TACCAACCGA TCGGGTTGCT TTTGCTGATT TAGTAGCAGA TGTTGATGGA
AAAATCCGCC GAGCTTTGTT ATCTATTGAA CGAGAAAATG GGGAAATACA ATTAGGATTA
GGGGCACAAT TAGCTTTAAT TTATCTCGCC GAAGAGGGAA TATTTTTAGA CCTAGAAAAT
CAAGACAAGA CTTCATTTAG ATTTAAGTTA GGAAAAGCGA CGATAAAGCC TTTTTCTTCT
AATGATGGAG GTTATGTTAA AGCCGATACG GGAGGCTATC AAATTTTCCT GAATTATCGA
GGGTGGGAAG ATAAATTTAA TACTGTTCCT CTGAGAGATA TTTTAGAAGG AAAAGTAGCT
CACCACTGGG GACGAGATCA AATTATTTTA ATTGGGGCAA CGGCAGAAAG TCTGAATGAT
AAGTTTTATA CTCCTTATCA TAGCAGTTAT TTAGTGGGTG ATATGCCTGA AAGAATGGCT
GGAGTTTTAA TTCATGCTAA TATTACCAGT CAATTGATTA GTGCGGCTTT AGAAGGTCGT
CCTTTAATTC AAGTTCTCCC TGAATTTTTA GAGTGGGGTT GGGTGTTAAT GTGGGGAATT
ATTGGGGCTT CTATGAGTTG GCTATTTTTT AAGCAAAATC TGTTTGAATT AAAAATTGGG
TTTTTGGGCA ATGTATTGGT CGTTAGTATT ATTATTCCTA GTGGGATTTT AGTGGGGGTG
AGTTACTGGG CTTTTCTTCA AGGCTGGTGG TTGCCAGTGT TTACTCCTTT TATCGCTTTA
ACTTTATCCG CTTTGGCTAT CCCTAATTAT AAAAACTATG AACTTTATCA AATAGCCTGT
AAGGATAGCT TAACCCAAAT TTCTAATCGT CGTTATTTCG ATCAATATTA TCCCCAAATT
TGGCATCGGA TTAAGGAAAC TCAACACCCT TTATCTGTAA TTCTATGTGA TGTTGATTTC
TTTAAACTGT ATAATGATAC CTATGGACAT CAAGCTGGCG ATCGCTGTTT ACAACAAGTC
GCTCAAGCCA TTACAAAAGC CGTTCGTTCT ACAGATTTAG TTGCCCGATA TGGTGGGGAA
GAATTTATTA TCGTTCTTCC GTCAACAGAT AGAGAGACTG CTTACCAGAT TGGGCAAAGA
ATCTGTTTTC AAGTCCAAAA TTTAAACATT CCCCATCAAC AATCTCAAAT CAGTTCTATT
GTTACTCTCA GTTGTGGTGT AGCGACTTCC TGTCCTCCTC ATTATGCTAC GTCAGGAGTT
TTAATTGCGG CTGCGGATAG TGCCCTTTAT GAAGCTAAAG CAAAAGGACG TAATTGTGCT
GTAGTCTGCT AA
 
Protein sequence
MWSRLRQNIA HWQGIIITAP SIVAVAFLGN TAGLFQMPEI AIYDHFMNWR PQETADPRIT 
VVTIDESDLD QYNFPIPDHK LAQAIKIIKQ QKPRAIGLDI YRDLPVNPGY EQLIAEFATT
DNLIGIEKVI GKTDSELVDP PHTIPTDRVA FADLVADVDG KIRRALLSIE RENGEIQLGL
GAQLALIYLA EEGIFLDLEN QDKTSFRFKL GKATIKPFSS NDGGYVKADT GGYQIFLNYR
GWEDKFNTVP LRDILEGKVA HHWGRDQIIL IGATAESLND KFYTPYHSSY LVGDMPERMA
GVLIHANITS QLISAALEGR PLIQVLPEFL EWGWVLMWGI IGASMSWLFF KQNLFELKIG
FLGNVLVVSI IIPSGILVGV SYWAFLQGWW LPVFTPFIAL TLSALAIPNY KNYELYQIAC
KDSLTQISNR RYFDQYYPQI WHRIKETQHP LSVILCDVDF FKLYNDTYGH QAGDRCLQQV
AQAITKAVRS TDLVARYGGE EFIIVLPSTD RETAYQIGQR ICFQVQNLNI PHQQSQISSI
VTLSCGVATS CPPHYATSGV LIAAADSALY EAKAKGRNCA VVC