Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1758 |
Symbol | |
ID | 7110416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1961298 |
End bp | 1963049 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643480020 |
Product | diguanylate cyclase with Chase2 sensor |
Protein accession | YP_002377061 |
Protein GI | 218438732 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.621597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTCAA GATTGAGGCA AAATATAGCC CATTGGCAAG GAATAATCAT TACAGCACCG TCTATAGTAG CTGTTGCCTT CCTCGGCAAT ACAGCCGGTC TTTTCCAGAT GCCAGAAATA GCTATCTATG ACCATTTTAT GAATTGGCGA CCCCAAGAAA CAGCCGACCC TAGAATTACT GTGGTAACAA TTGATGAGTC AGACTTAGAT CAATATAATT TTCCCATACC CGATCATAAA CTAGCACAAG CGATTAAGAT TATTAAACAA CAAAAACCTA GAGCGATTGG TTTAGACATT TATCGAGATT TGCCAGTTAA TCCAGGCTAC GAACAATTAA TCGCAGAATT TGCCACTACA GATAATTTAA TAGGAATTGA AAAAGTCATA GGGAAAACCG ATAGTGAATT AGTAGATCCT CCTCATACTA TACCAACCGA TCGGGTTGCT TTTGCTGATT TAGTAGCAGA TGTTGATGGA AAAATCCGCC GAGCTTTGTT ATCTATTGAA CGAGAAAATG GGGAAATACA ATTAGGATTA GGGGCACAAT TAGCTTTAAT TTATCTCGCC GAAGAGGGAA TATTTTTAGA CCTAGAAAAT CAAGACAAGA CTTCATTTAG ATTTAAGTTA GGAAAAGCGA CGATAAAGCC TTTTTCTTCT AATGATGGAG GTTATGTTAA AGCCGATACG GGAGGCTATC AAATTTTCCT GAATTATCGA GGGTGGGAAG ATAAATTTAA TACTGTTCCT CTGAGAGATA TTTTAGAAGG AAAAGTAGCT CACCACTGGG GACGAGATCA AATTATTTTA ATTGGGGCAA CGGCAGAAAG TCTGAATGAT AAGTTTTATA CTCCTTATCA TAGCAGTTAT TTAGTGGGTG ATATGCCTGA AAGAATGGCT GGAGTTTTAA TTCATGCTAA TATTACCAGT CAATTGATTA GTGCGGCTTT AGAAGGTCGT CCTTTAATTC AAGTTCTCCC TGAATTTTTA GAGTGGGGTT GGGTGTTAAT GTGGGGAATT ATTGGGGCTT CTATGAGTTG GCTATTTTTT AAGCAAAATC TGTTTGAATT AAAAATTGGG TTTTTGGGCA ATGTATTGGT CGTTAGTATT ATTATTCCTA GTGGGATTTT AGTGGGGGTG AGTTACTGGG CTTTTCTTCA AGGCTGGTGG TTGCCAGTGT TTACTCCTTT TATCGCTTTA ACTTTATCCG CTTTGGCTAT CCCTAATTAT AAAAACTATG AACTTTATCA AATAGCCTGT AAGGATAGCT TAACCCAAAT TTCTAATCGT CGTTATTTCG ATCAATATTA TCCCCAAATT TGGCATCGGA TTAAGGAAAC TCAACACCCT TTATCTGTAA TTCTATGTGA TGTTGATTTC TTTAAACTGT ATAATGATAC CTATGGACAT CAAGCTGGCG ATCGCTGTTT ACAACAAGTC GCTCAAGCCA TTACAAAAGC CGTTCGTTCT ACAGATTTAG TTGCCCGATA TGGTGGGGAA GAATTTATTA TCGTTCTTCC GTCAACAGAT AGAGAGACTG CTTACCAGAT TGGGCAAAGA ATCTGTTTTC AAGTCCAAAA TTTAAACATT CCCCATCAAC AATCTCAAAT CAGTTCTATT GTTACTCTCA GTTGTGGTGT AGCGACTTCC TGTCCTCCTC ATTATGCTAC GTCAGGAGTT TTAATTGCGG CTGCGGATAG TGCCCTTTAT GAAGCTAAAG CAAAAGGACG TAATTGTGCT GTAGTCTGCT AA
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Protein sequence | MWSRLRQNIA HWQGIIITAP SIVAVAFLGN TAGLFQMPEI AIYDHFMNWR PQETADPRIT VVTIDESDLD QYNFPIPDHK LAQAIKIIKQ QKPRAIGLDI YRDLPVNPGY EQLIAEFATT DNLIGIEKVI GKTDSELVDP PHTIPTDRVA FADLVADVDG KIRRALLSIE RENGEIQLGL GAQLALIYLA EEGIFLDLEN QDKTSFRFKL GKATIKPFSS NDGGYVKADT GGYQIFLNYR GWEDKFNTVP LRDILEGKVA HHWGRDQIIL IGATAESLND KFYTPYHSSY LVGDMPERMA GVLIHANITS QLISAALEGR PLIQVLPEFL EWGWVLMWGI IGASMSWLFF KQNLFELKIG FLGNVLVVSI IIPSGILVGV SYWAFLQGWW LPVFTPFIAL TLSALAIPNY KNYELYQIAC KDSLTQISNR RYFDQYYPQI WHRIKETQHP LSVILCDVDF FKLYNDTYGH QAGDRCLQQV AQAITKAVRS TDLVARYGGE EFIIVLPSTD RETAYQIGQR ICFQVQNLNI PHQQSQISSI VTLSCGVATS CPPHYATSGV LIAAADSALY EAKAKGRNCA VVC
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